RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 VPS18Q9P253 973 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF624Q9P2J8 865 aaPredicted RBP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 DCTN4Q9UJW0 460 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 MAN1B1Q9UKM7 699 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 TCFL5Q9UL49 500 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 CNOT6Q9ULM6 557 aaKnown RBP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 FZD10Q9ULW2 581 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 SIK3Q9Y2K2 1263 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF407Q9C0G0 2248 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 A0A1W2PQ67 120 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 PDZK1P1A8MUH7 402 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 MASP2O00187 686 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 BIN1O00499 593 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 CCP110O43303 1012 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 GRID2O43424 1007 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 SCRG1O75711 98 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 PGLSO95336 258 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 ALPPP05187 535 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 PYGLP06737 847 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 KLK3P07288 261 aaPredicted RBP5.25□□□□□ -1.57
HOXB3-213ENST00000552000 RAB40ALP0C0E4 278 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 KRT3P12035 628 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 XRCC1P18887 633 aaPredicted RBP5.25□□□□□ -1.57
HOXB3-213ENST00000552000 GPD1P21695 349 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 HTR1EP28566 365 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 OTX2P32243 289 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 RFC1P35251 1148 aaPredicted RBP5.25□□□□□ -1.57
HOXB3-213ENST00000552000 PPP1R2P41236 205 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 STC1P52823 247 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 KRTAP10-9P60411 292 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 IL10RBQ08334 325 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 HYAL2Q12891 473 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 GPR18Q14330 331 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 RFTN1Q14699 578 aaPredicted RBP5.25□□□□□ -1.57
HOXB3-213ENST00000552000 MYBPC3Q14896 1274 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 GPR19Q15760 415 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF124Q15973 351 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 SEPT7Q16181 437 aaKnown RBP5.25□□□□□ -1.57
HOXB3-213ENST00000552000 PLEKHS1Q5SXH7 462 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 ARMC12Q5T9G4 340 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 PRAMEF17Q5VTA0 474 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 IZUMO3Q5VZ72 239 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 WDR59Q6PJI9 974 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 CRTC3Q6UUV7 619 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 FAM198BQ6UWH4 519 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 Q6ZS92 163 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF765Q7L2R6 523 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 RAB43Q86YS6 212 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 ARHGAP12Q8IWW6 846 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 NXPE1Q8N323 547 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 PGBD5Q8N414 524 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 GALNT16Q8N428 558 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 NPWQ8N729 165 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 SLC38A9Q8NBW4 561 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 EXD1Q8NHP7 514 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 SLC30A5Q8TAD4 765 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 GRHL3Q8TE85 626 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 SLC20A1Q8WUM9 679 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 SCRN2Q96FV2 425 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 MAP3K3Q99759 626 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 NLNQ9BYT8 704 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 TRIM8Q9BZR9 551 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 OR2AG1Q9H205 316 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF552Q9H707 407 aaPredicted RBP5.25□□□□□ -1.57
HOXB3-213ENST00000552000 ZBTB20Q9HC78 741 aaPredicted RBP5.25□□□□□ -1.57
HOXB3-213ENST00000552000 LATS2Q9NRM7 1088 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 TMEM63CQ9P1W3 806 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 EPHA6Q9UF33 1036 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 DNAJC16Q9Y2G8 782 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 CSAG2Q9Y5P2 127 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 KLF2Q9Y5W3 355 aaPredicted RBP5.25□□□□□ -1.57
HOXB3-213ENST00000552000 FHOD1Q9Y613 1164 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 MXRA5Q9NR99 2828 aa5.25□□□□□ -1.57
HOXB3-213ENST00000552000 NUP210LQ5VU65 1888 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 ROS1P08922 2347 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 VPS13CQ709C8 3753 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 A0A1B0GUH1 482 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 TLDC2A0PJX2 215 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 GTPBP10A4D1E9 387 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 OR52A4PA6NMU1 304 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 FADS2P1A8MWK0 482 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 EEF2KO00418 725 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 DDX3YO15523 660 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 DAPK3O43293 454 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 LDB2O43679 373 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 PRICKLE3O43900 615 aaPredicted RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 NUAK1O60285 661 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 MTA2O94776 668 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 LCA5LO95447 670 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 NADKO95544 446 aaPredicted RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 FGFR1OPO95684 399 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 JCHAINP01591 159 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CYP1A1P04798 512 aaPredicted RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 F13BP05160 661 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CAPN1P07384 714 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 PDHA1P08559 390 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 STSP08842 583 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 EDN3P14138 238 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 BRAFP15056 766 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF8P17098 575 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms