RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PLA2G2AP14555 144 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CHN1P15882 459 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 PRKCHP24723 683 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 FPR3P25089 353 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 PSMA5P28066 241 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CDC25CP30307 473 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SLC8A1P32418 973 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 MAN1A1P33908 653 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CA8P35219 290 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ADRA1BP35368 520 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 KRT2P35908 639 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TNFRSF4P43489 277 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TUFMP49411 452 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ACOT2P49753 483 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CCR5P51681 352 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CASP6P55212 293 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 FAM3BP58499 235 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TAS2R50P59544 299 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 RPP30P78346 268 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 RAE1P78406 368 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 MRPS21P82921 87 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF33AQ06730 810 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 GRSF1Q12849 480 aaKnown RBP eCLIP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 DMP1Q13316 513 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF169Q14929 603 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 NFIL3Q16649 462 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 COL28A1Q2UY09 1125 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SLC39A12Q504Y0 691 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 GLE1Q53GS7 698 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 RUNDC3AQ59EK9 446 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 RNASE12Q5GAN4 147 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 WDR45BQ5MNZ6 344 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CBWD5Q5RIA9 395 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 LIPMQ5VYY2 423 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 DENND1BQ6P3S1 775 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM65Q6PI78 240 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 VSTM1Q6UX27 236 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SERPINA13PQ6UXR4 307 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 NAPRTQ6XQN6 538 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 Q6YL49 198 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 C4orf50Q6ZRC1 276 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 HAUS6Q7Z4H7 955 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SCD5Q86SK9 330 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ERICH1Q86X53 443 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM25Q86YD3 366 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 LURAP1LQ8IV03 231 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CD302Q8IX05 232 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF843Q8N446 348 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ALLCQ8N6M5 410 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 LRRC52Q8N7C0 313 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 LSM14AQ8ND56 463 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SPATA18Q8TC71 538 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SPPL2BQ8TCT7 592 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 RFFLQ8WZ73 363 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ST8SIA4Q92187 359 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 AKAP1Q92667 903 aaKnown RBP eCLIP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 KCNJ9Q92806 393 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CD101Q93033 1021 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SH3KBP1Q96B97 665 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TRMT61AQ96FX7 289 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 PDLIM2Q96JY6 352 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 MMS19Q96T76 1030 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 NPAS1Q99742 590 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 LLPHQ9BRT6 129 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 THAP7Q9BT49 309 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TIPINQ9BVW5 301 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CCDC94Q9BW85 323 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TRIM6Q9C030 488 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TRIM2Q9C040 744 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CIPCQ9C0C6 399 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 PAIP1Q9H074 479 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SDCBP2Q9H190 292 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 PDCL3Q9H2J4 239 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM245Q9H330 911 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SYNPO2LQ9H987 977 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 KIF9Q9HAQ2 790 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ZDHHC4Q9NPG8 344 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM9BQ9NQ34 198 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 DMAC2Q9NW81 257 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 KCND2Q9NZV8 630 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 SLC25A13Q9UJS0 675 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 STOML2Q9UJZ1 356 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 FBXO9Q9UK97 447 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ENTPD2Q9Y5L3 495 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 COPG1Q9Y678 874 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CYP46A1Q9Y6A2 500 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 EPN1Q9Y6I3 576 aaPredicted RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 MYO9AB2RTY4 2548 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CENPEQ02224 2701 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ABCA12Q86UK0 2595 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TSC2P49815 1807 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 MIA3Q5JRA6 1907 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TICRRQ7Z2Z1 1910 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 MTORP42345 2549 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 MYO18AQ92614 2054 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TRIP11Q15643 1979 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 COL27A1Q8IZC6 1860 aaPredicted RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ARHGEF35A5YM69 484 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TRABD2BA6NFA1 517 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms