RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SEMA3CQ99985 751 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 FAM118BQ9BPY3 351 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 HEPHQ9BQS7 1158 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ADGRE3Q9BY15 652 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 DDX47Q9H0S4 455 aaKnown RBP5.76□□□□□ -1.49
SCAF11-213ENST00000550629 NOD2Q9HC29 1040 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 NT5MQ9NPB1 228 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 PRSS16Q9NQE7 514 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 EIF2B3Q9NR50 452 aaKnown RBP5.76□□□□□ -1.49
SCAF11-213ENST00000550629 GOLGA6AQ9NYA3 693 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 DLGAP2Q9P1A6 1054 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 DKK3Q9UBP4 350 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 IL36AQ9UHA7 158 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 RSPH14Q9UHP6 348 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 AAR2Q9Y312 384 aaKnown RBP5.76□□□□□ -1.49
SCAF11-213ENST00000550629 MTF2Q9Y483 593 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-213ENST00000550629 NCOR1O75376 2440 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 NYNRINQ9P2P1 1898 aaKnown RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 TSPAN11A1L157 253 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 SLC7A4O43246 635 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 HTRA2O43464 458 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ALDH1A2O94788 518 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 SUN1O94901 812 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 APBB3O95704 486 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 LY86O95711 162 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 IFNB1P01574 187 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 IGLV3-19P01714 112 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 KRT14P02533 472 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 MMP2P08253 660 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 C5AR1P21730 350 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 NFKBIAP25963 317 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 HSD3B2P26439 372 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 RPL22P35268 128 aaKnown RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 TNNT3P45378 269 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 RGRP47804 291 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 KCNJ1P48048 391 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 CXCL12P48061 93 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 DRG2P55039 364 aaKnown RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 GEMP55040 296 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 BCL2L1Q07817 233 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ITKQ08881 620 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 NIPAL4Q0D2K0 466 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 MTAPQ13126 283 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 MPP3Q13368 585 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 SEMA5AQ13591 1074 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 PPP1R7Q15435 360 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 LSM12Q3MHD2 195 aaKnown RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF805Q5CZA5 627 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ATXN7L2Q5T6C5 722 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF776Q68DI1 518 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 NCEH1Q6PIU2 408 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 GDPD4Q6W3E5 623 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 Q6ZS52 159 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 STRA8Q7Z7C7 330 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 PCGF5Q86SE9 256 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 LINC00523Q86TU6 105 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 PRPF39Q86UA1 669 aaKnown RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 RASSF3Q86WH2 238 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 TMPRSS6Q8IU80 811 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 LYSMD2Q8IV50 215 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 KLHL7Q8IXQ5 586 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 RYBPQ8N488 228 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 BBOF1Q8ND07 529 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 CCDC110Q8TBZ0 833 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 RAB7BQ96AH8 199 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 FAM131CQ96AQ9 280 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 VOPP1Q96AW1 172 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ECHDC3Q96DC8 303 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 FEM1CQ96JP0 617 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 KRT12Q99456 494 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ERP44Q9BS26 406 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 FRMD8Q9BZ67 464 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 FAM129AQ9BZQ8 928 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 TM6SF2Q9BZW4 377 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 RAB17Q9H0T7 212 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF703Q9H7S9 590 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 C10orf88Q9H8K7 445 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 LRRC40Q9H9A6 602 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 ARNT2Q9HBZ2 717 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 AURKAIP1Q9NWT8 199 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 FAM153AQ9UHL3 310 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 FZD4Q9ULV1 537 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 TMA7Q9Y2S6 64 aaKnown RBP5.75□□□□□ -1.49
SCAF11-213ENST00000550629 F5P12259 2224 aa5.75□□□□□ -1.49
SCAF11-213ENST00000550629 LOC285095A0A1B0GVY8 99 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 E7EVH7 732 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TRAFD1O14545 582 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TTI1O43156 1089 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 AP1G1O43747 822 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF217O75362 1048 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 PGLSO95336 258 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 METTL18O95568 372 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 AP2A1O95782 977 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 HLA-EP13747 358 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 HLA-DPA1P20036 260 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TPSB2P20231 275 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 XPAP23025 273 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 OXTRP30559 389 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 SLC8A1P32418 973 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 ADRA1AP35348 466 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms