RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	UNC80	Q8N2C7	3258 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160		A0A1B0GTW7	788 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160		A0A1W2PR77	199 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	SYCE1L	A8MT33	242 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160		H3BM21	787 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	BTN3A1	O00481	513 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	VILL	O15195	856 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	GPC4	O75487	556 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLCO2B1	O94956	709 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	WISP3	O95389	354 aa	Predicted RBP	11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	TNF	P01375	233 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	MPC1L	P0DKB6	136 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	ACP5	P13686	325 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	CD1D	P15813	335 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	CREB1	P16220	341 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	TFEB	P19484	476 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	TAC1	P20366	129 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	MAOB	P27338	520 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	RPA3	P35244	121 aa	Predicted RBP	11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	GLRB	P48167	497 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	PGGT1B	P53609	377 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	DMPK	Q09013	629 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	ILF3	Q12906	894 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	7e-7	■■■■□ 24
CNOT2-223	ENST00000550160	SP140	Q13342	867 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	ALG11	Q2TAA5	492 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	PLK5	Q496M5	336 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	ACSBG2	Q5FVE4	666 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	ZC3H14	Q6PJT7	736 aa	Known RBP	11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	TMEM207	Q6UWW9	146 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	FRA10AC1	Q70Z53	315 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	CHST15	Q7LFX5	561 aa	Predicted RBP	11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	HID1	Q8IV36	788 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	ZNF547	Q8IVP9	402 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	CFAP206	Q8IYR0	622 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	RHEBL1	Q8TAI7	183 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	STAG3L4	Q8TBR4	150 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	RDH11	Q8TC12	318 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	ANKRD49	Q8WVL7	239 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	OR1E3	Q8WZA6	343 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	FAM111A	Q96PZ2	611 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC30A3	Q99726	388 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	C1QTNF1	Q9BXJ1	281 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	TRIM54	Q9BYV2	358 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	DPEP2	Q9H4A9	486 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	OSGEPL1	Q9H4B0	414 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	TFB2M	Q9H5Q4	396 aa	Known RBP	11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	COG4	Q9H9E3	785 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	GPR27	Q9NS67	375 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	IGSF5	Q9NSI5	407 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	INTS9	Q9NV88	658 aa	Known RBP	11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	FAM53C	Q9NYF3	392 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	OGFR	Q9NZT2	677 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	ACSL5	Q9ULC5	683 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	PRKAB1	Q9Y478	270 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	DGKB	Q9Y6T7	804 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	CACNA1I	Q9P0X4	2223 aa		11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.4	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC5A10	A0PJK1	596 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	TLR4	O00206	839 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	IFRD1	O00458	451 aa	Predicted RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	HR	O43593	1189 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	ZBTB14	O43829	449 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	PLIN3	O60664	434 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	GPR37L1	O60883	481 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	TSPAN12	O95859	305 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	S100B	P04271	92 aa	Predicted RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	C8G	P07360	202 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	SLC35G4	P0C7Q5	338 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	NEFH	P12036	1026 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	CTSE	P14091	401 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	IDS	P22304	550 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	HOXD12	P35452	270 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	HK3	P52790	923 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	IL9R	Q01113	521 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	ASPH	Q12797	758 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	SRSF5	Q13243	272 aa	Known RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	SIM2	Q14190	667 aa	Predicted RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	GBX1	Q14549	363 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	LVRN	Q6Q4G3	990 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	NAPRT	Q6XQN6	538 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	CDHR3	Q6ZTQ4	885 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	C11orf96	Q7Z7L8	435 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	TAX1BP1	Q86VP1	789 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	PHACTR4	Q8IZ21	702 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	SLC22A15	Q8IZD6	547 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	SLC22A18AS	Q8N1D0	253 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	PLD6	Q8N2A8	252 aa	Known RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	FSTL5	Q8N475	847 aa	Predicted RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	SPATA6L	Q8N4H0	392 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	ZBTB44	Q8NCP5	570 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	ARMC2	Q8NEN0	867 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	MGARP	Q8TDB4	240 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	DYDC1	Q8WWB3	177 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	TSACC	Q96A04	125 aa	Predicted RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	KIAA1191	Q96A73	305 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	CCDC126	Q96EE4	140 aa		11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	ZC3H10	Q96K80	434 aa	Known RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	PAIP2	Q9BPZ3	127 aa	Known RBP	11.39	□□□□□ -0.59
CNOT2-223	ENST00000550160	ALG9	Q9H6U8	611 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms