RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 AADACL2Q6P093 401 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 KMT5CQ86Y97 462 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 LRRC57Q8N9N7 239 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 SIDT2Q8NBJ9 832 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 CT55Q8WUE5 264 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 ABHD17AQ96GS6 310 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 CALR3Q96L12 384 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 FERMT1Q9BQL6 677 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 KIR3DX1Q9H7L2 352 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 PDE7BQ9NP56 450 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 ZNF71Q9NQZ8 489 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 RARRES3Q9UL19 164 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 ACSL5Q9ULC5 683 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 PCDHGA6Q9Y5G7 932 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 KCNMB2Q9Y691 235 aa16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 EPN1Q9Y6I3 576 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-205ENST00000548650 BTNL10A8MVZ5 291 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 STK10O94804 968 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 CASRP41180 1078 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 PRLHRP49683 370 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 RWDD2BP57060 319 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 PRPSAP1Q14558 356 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 RAD9BQ6WBX8 426 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 OOSP2Q86WS3 158 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 NXPE1Q8N323 547 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 LILRA3Q8N6C8 439 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 HM13Q8TCT9 377 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 C19orf43Q9BQ61 176 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 TBL1YQ9BQ87 522 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 LHX9Q9NQ69 397 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 CRLS1Q9UJA2 301 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 KCND3Q9UK17 655 aa16.97■□□□□ 0.31
CHMP1A-205ENST00000548650 LRRK2Q5S007 2527 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 GRID2IPA4D2P6 1211 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 CCL22O00626 93 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 CRTAMO95727 393 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 MT-ND3P03897 115 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 PYGMP11217 842 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ITGALP20701 1170 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ZNF75DP51815 510 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 PDE1BQ01064 536 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ACY1Q03154 408 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ERV3-1Q14264 604 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 DARS2Q6PI48 645 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 MICALCLQ6ZW33 695 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 TMEM135Q86UB9 458 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 TMTC1Q8IUR5 882 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 D2HGDHQ8N465 521 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ACRBPQ8NEB7 543 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ZFPM2Q8WW38 1151 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ULK4Q96C45 1275 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 MRFAP1L1Q96HT8 127 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 FCRL4Q96PJ5 515 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 PPP1R2P1Q96PQ5 205 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 RUFY1Q96T51 708 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ARNT2Q9HBZ2 717 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 FGF21Q9NSA1 209 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 HRASLS2Q9NWW9 162 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 ANAPC2Q9UJX6 822 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 PADI1Q9ULC6 663 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 POLHQ9Y253 713 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 PCDHB3Q9Y5E6 796 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 DOPEY2Q9Y3R5 2298 aa16.96■□□□□ 0.31
CHMP1A-205ENST00000548650 SPTBP11277 2137 aa16.96■□□□□ 0.3
CHMP1A-205ENST00000548650 IGLV3-16A0A075B6K0 115 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 OR6C74A6NCV1 312 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 C21orf140B9A014 251 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 ARHGAP6O43182 974 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 LDB2O43679 373 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 KATNA1O75449 491 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 TJP3O95049 919 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 IPO7O95373 1038 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 CCNYL3P0C7X3 344 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 KPNA2P52292 529 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 HSD11B2P80365 405 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 TMPRSS15P98073 1019 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 SEPT6Q14141 434 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 SPARCL1Q14515 664 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 ZNF658BQ4V348 819 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 LACTB2Q53H82 288 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 KCTD11Q693B1 232 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 CAPRIN2Q6IMN6 1127 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 SNX20Q7Z614 316 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 CARFQ8N187 725 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 DCUN1D1Q96GG9 259 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 DNAJC1Q96KC8 554 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 PPM1MQ96MI6 270 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 COPS8Q99627 209 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 ACTL8Q9H568 366 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 FAM96AQ9H5X1 160 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 AKIRIN1Q9H9L7 192 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 FEZ2Q9UHY8 353 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 BTRCQ9Y297 605 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 TP53TG5Q9Y2B4 290 aa16.95■□□□□ 0.3
CHMP1A-205ENST00000548650 TRBV5-4A0A0C4DH59 114 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 UBA6A0AVT1 1052 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 CDC14CA4D256 554 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 CREG1O75629 220 aa16.94■□□□□ 0.3
CHMP1A-205ENST00000548650 ZBTB11O95625 1053 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms