RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 CERCAMQ5T4B2 595 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 PHF19Q5T6S3 580 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 RNF219Q5W0B1 726 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 BSPRYQ5W0U4 402 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 ESRP1Q6NXG1 681 aaKnown RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 ABHD17CQ6PCB6 329 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 UBE2R2Q712K3 238 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 TAOK1Q7L7X3 1001 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 TIPARPQ7Z3E1 657 aaKnown RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 CPLX4Q7Z7G2 160 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 MMP21Q8N119 569 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 CISD2Q8N5K1 135 aaKnown RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 CCDC63Q8NA47 563 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 Q8NA96 180 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 CHST14Q8NCH0 376 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 GPR156Q8NFN8 814 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 OR2A12Q8NGT7 310 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 PARD3BQ8TEW8 1205 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 STARD8Q92502 1023 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 NINJ1Q92982 152 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 VOPP1Q96AW1 172 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 ZBTB8AQ96BR9 441 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 SPDL1Q96EA4 605 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 PGM2Q96G03 612 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 RUNDC3BQ96NL0 473 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 TRAPPC9Q96Q05 1148 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 GORASP1Q9BQQ3 440 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 NUDT22Q9BRQ3 303 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 SLC17A9Q9BYT1 436 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 TRIM7Q9C029 511 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 LRRC27Q9C0I9 530 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 FAM192AQ9GZU8 254 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 SUDS3Q9H7L9 328 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 NOD2Q9HC29 1040 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 PANK4Q9NVE7 773 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 INTS7Q9NVH2 962 aaKnown RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 CTTNBP2NLQ9P2B4 639 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 APPL1Q9UKG1 709 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 PILRAQ9UKJ1 303 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 ITGB1BP2Q9UKP3 347 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 ITM2BQ9Y287 266 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 REXO2Q9Y3B8 237 aaKnown RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 MRPS18BQ9Y676 258 aaKnown RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 BZW2Q9Y6E2 419 aaKnown RBP6.62□□□□□ -1.35
CCDC60-205ENST00000546345 ATP23Q9Y6H3 246 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 PIKFYVEQ9Y2I7 2098 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 CCDC88CQ9P219 2028 aa6.62□□□□□ -1.35
CCDC60-205ENST00000546345 DOCK10Q96BY6 2186 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 NCOA6Q14686 2063 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 LRRD1A4D1F6 860 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 EIF3DO15371 548 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 HNRNPRO43390 633 aaKnown RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 DNAJB5O75953 348 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 GFPT2O94808 682 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 RHOBTB3O94955 611 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 PCDH8O95206 1070 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 NUDT17P0C025 328 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 MYBL2P10244 700 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 FAHP16930 419 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 CD58P19256 250 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 F8A1P23610 371 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 CSF2RBP32927 897 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 MAGEA8P43361 318 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 SLC11A2P49281 568 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 PAPOLAP51003 745 aaKnown RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 RPS6KA3P51812 740 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 PLK1P53350 603 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 DRG2P55039 364 aaKnown RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 DAOAP59103 153 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 ELF3P78545 371 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 BIRC2Q13490 618 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 DLG2Q15700 870 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 PARP6Q2NL67 630 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 ALG11Q2TAA5 492 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 ERMARDQ5T6L9 678 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 KIAA1161Q6NSJ0 714 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 WDR59Q6PJI9 974 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 MACC1Q6ZN28 852 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 ERN2Q76MJ5 926 aaKnown RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 OVCH1Q7RTY7 1134 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 TMEM135Q86UB9 458 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 STK32CQ86UX6 486 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 C1QL4Q86Z23 238 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 MCEMP1Q8IX19 187 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 C12orf56Q8IXR9 622 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 SLC34A3Q8N130 599 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 SH2D3CQ8N5H7 860 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 LINC00482Q8N8I6 264 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 BMPERQ8N8U9 685 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 Q8N9G6 341 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 XXYLT1Q8NBI6 393 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 ACTRT1Q8TDG2 376 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 ART4Q93070 314 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 AZIN2Q96A70 460 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 ZBTB9Q96C00 473 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 SLC39A13Q96H72 371 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 MED15Q96RN5 788 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 KRTAP4-12Q9BQ66 201 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms