RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 NMBRP28336 390 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 ECHS1P30084 290 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 MC4RP32245 332 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 FOXN2P32314 431 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 TRIM23P36406 574 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CTSKP43235 329 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 KIR3DL1P43629 444 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 DRG2P55039 364 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PLTPP55058 493 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 YPEL5P62699 121 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PRAMEP78395 509 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 XIAPP98170 497 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PDIA2Q13087 525 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PEX6Q13608 980 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CUL1Q13616 776 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PTK2BQ14289 1009 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 HLTFQ14527 1009 aaKnown RBP eCLIP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CRYMQ14894 314 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 FASTKD3Q14CZ7 662 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 TRADDQ15628 312 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 SMAD1Q15797 465 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CHRNA6Q15825 494 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 KIF19Q2TAC6 998 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 FNBP1LQ5T0N5 605 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 KIAA0930Q6ICG6 404 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 DOK6Q6PKX4 331 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CES3Q6UWW8 571 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 MICALCLQ6ZW33 695 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CENPUQ71F23 418 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 ASCL5Q7RTU5 278 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CCDC25Q86WR0 208 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 OXR1Q8N573 874 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 DDHD1Q8NEL9 900 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 DNAJB8Q8NHS0 232 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 DTX3LQ8TDB6 740 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 RUBCNQ92622 972 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 GLYATL1Q969I3 302 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 FUBP1Q96AE4 644 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 LRRC39Q96DD0 335 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 MFSD3Q96ES6 412 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 COX14Q96I36 57 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 HIC2Q96JB3 615 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 WDR92Q96MX6 357 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 VPS35Q96QK1 796 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 FMO2Q99518 471 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 NAT9Q9BTE0 207 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 APOOQ9BUR5 198 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 NUSAP1Q9BXS6 441 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 TEX101Q9BY14 249 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 ZDHHC5Q9C0B5 715 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 SUDS3Q9H7L9 328 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 EPB41L5Q9HCM4 733 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 FGF22Q9HCT0 170 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 FSCN3Q9NQT6 498 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 GDF3Q9NR23 364 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CHRAC1Q9NRG0 131 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 ZDHHC18Q9NUE0 388 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 KLQ9UEF7 1012 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 MTRF1LQ9UGC7 380 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CRLS1Q9UJA2 301 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 ANKRD6Q9Y2G4 727 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 HS3ST3A1Q9Y663 406 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 SLC30A1Q9Y6M5 507 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 RPS6KL1Q9Y6S9 549 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 TRBV5-4A0A0C4DH59 114 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SPTY2D1-AS1A0A0U1RR47 76 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ZCWPW2A0A1B0GU75 182 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 PRSS38A1L453 326 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 TMEM202A6NGA9 273 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 EIF3HO15372 352 aaKnown RBP eCLIP6.25□□□□□ -1.413e-6■□□□□ 11.2
PRKDC-211ENST00000546304 MTX2O75431 263 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 TTC4O95801 387 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 GOT2P00505 430 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 POLBP06746 335 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SYPP08247 313 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 HOXC4P09017 264 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF806P0C7X5 589 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ENGP17813 658 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 AKT1P31749 480 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ELK3P41970 407 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CARSP49589 748 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CCT8P50990 548 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 BNC1Q01954 994 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CACNG1Q06432 222 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 IKZF1Q13422 519 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 FZD2Q14332 565 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SF3A2Q15428 464 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CSRP2Q16527 193 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ALG11Q2TAA5 492 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 GPR33Q49SQ1 333 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ANKRD20A4Q4UJ75 823 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 KHDC1Q4VXA5 237 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ZRANB3Q5FWF4 1079 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 AARS2Q5JTZ9 985 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SNAP47Q5SQN1 464 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms