RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 STAMBPL1Q96FJ0 436 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 SLC41A2Q96JW4 573 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 INSM2Q96T92 566 aaPredicted RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 FRMD8P1Q9BZ68 369 aaPredicted RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 WWP1Q9H0M0 922 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 SLC25A18Q9H1K4 315 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 KIR3DX1Q9H7L2 352 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 HRASLS2Q9NWW9 162 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 ZDHHC3Q9NYG2 299 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 SLC24A2Q9UI40 661 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 LNPEPQ9UIQ6 1025 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 TUBD1Q9UJT1 453 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 KCND3Q9UK17 655 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 PADI1Q9ULC6 663 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 FREM2Q5SZK8 3169 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 OR6C74A6NCV1 312 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 OR5K3A6NET4 321 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 GOLGA6L3A6NEY3 463 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 TLCD2A6NGC4 264 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 ERI2A8K979 691 aaKnown RBP9.14□□□□□ -0.95
YBX3-218ENST00000546298 F8W8V4 182 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 MATN2O00339 956 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 IFRD1O00458 451 aaPredicted RBP9.14□□□□□ -0.95
YBX3-218ENST00000546298 DDX3YO15523 660 aaKnown RBP9.14□□□□□ -0.95
YBX3-218ENST00000546298 MAP3K7O43318 606 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 LDB2O43679 373 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 SPAG6O75602 509 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 KIAA0754O94854 1291 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 FTCDO95954 541 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 RECKO95980 971 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 ITGB6P18564 788 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 MC4RP32245 332 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 CA5AP35218 305 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 HSD11B2P80365 405 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 CDC20Q12834 499 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 KLF1Q13351 362 aaPredicted RBP9.14□□□□□ -0.95
YBX3-218ENST00000546298 TUBB3Q13509 450 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 OLIG2Q13516 323 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 SEPT6Q14141 434 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 SKIDA1Q1XH10 827 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 ZRANB3Q5FWF4 1079 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 SEL1L2Q5TEA6 688 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 KCTD11Q693B1 232 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 PRICKLE2Q7Z3G6 844 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 UNC5BQ8IZJ1 945 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 GPR150Q8NGU9 434 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 OR8K5Q8NH50 307 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 SLC35B2Q8TB61 432 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 STYXQ8WUJ0 223 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 APOBEC4Q8WW27 367 aaKnown RBP9.14□□□□□ -0.95
YBX3-218ENST00000546298 STARD8Q92502 1023 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.14□□□□□ -0.95
YBX3-218ENST00000546298 HES6Q96HZ4 224 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 ELMO2Q96JJ3 720 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 TTC1Q99614 292 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 MAP3K3Q99759 626 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 TSGA10Q9BZW7 698 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 NLE1Q9NVX2 485 aaPredicted RBP9.14□□□□□ -0.95
YBX3-218ENST00000546298 FAM8A1Q9UBU6 413 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 IL17BQ9UHF5 180 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 PACSIN2Q9UNF0 486 aaPredicted RBP9.14□□□□□ -0.95
YBX3-218ENST00000546298 CFAP20Q9Y6A4 193 aaKnown RBP9.14□□□□□ -0.95
YBX3-218ENST00000546298 BAHCC1Q9P281 2608 aa9.14□□□□□ -0.95
YBX3-218ENST00000546298 IGSF10Q6WRI0 2623 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 IGHV5-51A0A0C4DH38 117 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 TRBV5-4A0A0C4DH59 114 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 H7C0S8 307 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 QSOX1O00391 747 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 KRT86O43790 486 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 AP2A2O94973 939 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 METTL18O95568 372 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 ZBTB11O95625 1053 aaPredicted RBP9.13□□□□□ -0.95
YBX3-218ENST00000546298 AP2A1O95782 977 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 PRKAR1AP10644 381 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 TPH1P17752 444 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 ACRV1P26436 265 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 DLSTP36957 453 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 FDFT1P37268 417 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 CD151P48509 253 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 POLE2P56282 527 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 PLOD1Q02809 727 aaPredicted RBP9.13□□□□□ -0.95
YBX3-218ENST00000546298 CACNG1Q06432 222 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 RPA4Q13156 261 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 KCNAB2Q13303 367 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 CAPRIN2Q6IMN6 1127 aaKnown RBP9.13□□□□□ -0.95
YBX3-218ENST00000546298 C16orf46Q6P387 395 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 SERPINA9Q86WD7 417 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 GAS2L3Q86XJ1 694 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 TMEM139Q8IV31 216 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 D2HGDHQ8N465 521 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 DNAAF3Q8N9W5 541 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 SPC24Q8NBT2 197 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 GALNT6Q8NCL4 622 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 ACVR1CQ8NER5 493 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 SPDYE1Q8NFV5 336 aaPredicted RBP9.13□□□□□ -0.95
YBX3-218ENST00000546298 LCN9Q8WX39 176 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 SEC14L1Q92503 715 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 CDKN2AIPNLQ96HQ2 116 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 DNAJC1Q96KC8 554 aaKnown RBP9.13□□□□□ -0.95
YBX3-218ENST00000546298 RMDN2Q96LZ7 410 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms