RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FASTKD1Q53R41 847 aaKnown RBP11.61□□□□□ -0.55
YBX3-217ENST00000546164 AARS2Q5JTZ9 985 aaKnown RBP11.61□□□□□ -0.55
YBX3-217ENST00000546164 ANKRD22Q5VYY1 191 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 CAND1Q86VP6 1230 aaKnown RBP11.61□□□□□ -0.55
YBX3-217ENST00000546164 PLXDC1Q8IUK5 500 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 CFAP206Q8IYR0 622 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 MPP5Q8N3R9 675 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 AGBL5Q8NDL9 886 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 RCBTB1Q8NDN9 531 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 GPR150Q8NGU9 434 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 OR6P1Q8NGX9 317 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 NCSTNQ92542 709 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 RMDN2Q96LZ7 410 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 INSM2Q96T92 566 aaPredicted RBP11.61□□□□□ -0.55
YBX3-217ENST00000546164 RAB33BQ9H082 229 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 WWP1Q9H0M0 922 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 OR52A5Q9H2C5 316 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 COG4Q9H9E3 785 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 XAB2Q9HCS7 855 aaKnown RBP11.61□□□□□ -0.55
YBX3-217ENST00000546164 IMP3Q9NV31 184 aaKnown RBP11.61□□□□□ -0.55
YBX3-217ENST00000546164 SYBUQ9NX95 663 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 EPHA6Q9UF33 1036 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 PCYOX1Q9UHG3 505 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 SOX13Q9UN79 622 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 PSMD13Q9UNM6 376 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 PCDHGA3Q9Y5H0 932 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 SAR1BQ9Y6B6 198 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 PRSS21Q9Y6M0 314 aa11.61□□□□□ -0.55
YBX3-217ENST00000546164 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 B4E171 279 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 F8W8V4 182 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 FANCGO15287 622 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 TOX3O15405 576 aaPredicted RBP11.6□□□□□ -0.55
YBX3-217ENST00000546164 KRT37O76014 449 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 FTH1P02794 183 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 ITIH1P19827 911 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 ARNTP27540 789 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 NDUFS1P28331 727 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 NMBRP28336 390 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 CSTF2P33240 577 aaKnown RBP eCLIP11.6□□□□□ -0.55
YBX3-217ENST00000546164 ETV5P41161 510 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 TSPAN7P41732 249 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 CD151P48509 253 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 TTPAP49638 278 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 KCTD19Q17RG1 926 aaPredicted RBP11.6□□□□□ -0.55
YBX3-217ENST00000546164 KLHL35Q6PF15 583 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 FOXR1Q6PIV2 292 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 LILRA3Q8N6C8 439 aaPredicted RBP11.6□□□□□ -0.55
YBX3-217ENST00000546164 NAT8LQ8N9F0 302 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 C12orf66Q96MD2 445 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 SERPINB12Q96P63 405 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 DPH1Q9BZG8 443 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 ZMYND15Q9H091 742 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 DDX47Q9H0S4 455 aaKnown RBP11.6□□□□□ -0.55
YBX3-217ENST00000546164 CATSPERZQ9NTU4 200 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 RNF14Q9UBS8 474 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 PISDQ9UG56 409 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 HEBP2Q9Y5Z4 205 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.6□□□□□ -0.55
YBX3-217ENST00000546164 NBEAQ8NFP9 2946 aa11.6□□□□□ -0.55
YBX3-217ENST00000546164 MAGEB16A2A368 324 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 LIN7AO14910 233 aaPredicted RBP11.59□□□□□ -0.55
YBX3-217ENST00000546164 CD3EAPO15446 510 aaKnown RBP11.59□□□□□ -0.55
YBX3-217ENST00000546164 OR1I1O60431 355 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 AVILO75366 819 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 POLBP06746 335 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 OR56A5P0C7T3 313 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 FGF3P11487 239 aaPredicted RBP11.59□□□□□ -0.55
YBX3-217ENST00000546164 CCL4P13236 92 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 TYRP1P17643 537 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 AMD1P17707 334 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 MPSTP25325 297 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 CD82P27701 267 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 SLC5A2P31639 672 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 PTGIRP43119 386 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 MAPK9P45984 424 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 PLOD1Q02809 727 aaPredicted RBP11.59□□□□□ -0.55
YBX3-217ENST00000546164 PTK6Q13882 451 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 SEMA3AQ14563 771 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 PPP1R7Q15435 360 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 RNASEH2BQ5TBB1 312 aaKnown RBP11.59□□□□□ -0.55
YBX3-217ENST00000546164 KIAA0930Q6ICG6 404 aaPredicted RBP11.59□□□□□ -0.55
YBX3-217ENST00000546164 ZNF449Q6P9G9 518 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 LRRC69Q6ZNQ3 347 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 SPACA3Q8IXA5 215 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 PPIL6Q8IXY8 311 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 BMPERQ8N8U9 685 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 RSC1A1Q92681 617 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 MFSD3Q96ES6 412 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 C9orf72Q96LT7 481 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 RUNDC3BQ96NL0 473 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 OCEL1Q9H607 264 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 KIR3DX1Q9H7L2 352 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 SEMA5BQ9P283 1151 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
YBX3-217ENST00000546164 FAM8A1Q9UBU6 413 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 SLC24A2Q9UI40 661 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 ANAPC5Q9UJX4 755 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 COLEC10Q9Y6Z7 277 aa11.59□□□□□ -0.55
YBX3-217ENST00000546164 PIKFYVEQ9Y2I7 2098 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms