RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TPRKBQ9Y3C4 175 aa14□□□□□ -0.17
SRP54-202ENST00000546080 LCHNA4D1U4 455 aa14□□□□□ -0.17
SRP54-202ENST00000546080 BTN3A1O00481 513 aa14□□□□□ -0.17
SRP54-202ENST00000546080 SLC16A6O15403 523 aa14□□□□□ -0.17
SRP54-202ENST00000546080 NUAK1O60285 661 aa14□□□□□ -0.17
SRP54-202ENST00000546080 DFNA5O60443 496 aa14□□□□□ -0.17
SRP54-202ENST00000546080 GSNP06396 782 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ATXN1LP0C7T5 689 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 G6PDP11413 515 aa14□□□□□ -0.17
SRP54-202ENST00000546080 PTPN2P17706 415 aa14□□□□□ -0.17
SRP54-202ENST00000546080 DCTP40126 519 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ARL1P40616 181 aaPredicted RBP14□□□□□ -0.17
SRP54-202ENST00000546080 ST13P50502 369 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 STC1P52823 247 aa14□□□□□ -0.17
SRP54-202ENST00000546080 SLC13A2Q13183 592 aa14□□□□□ -0.17
SRP54-202ENST00000546080 RAPSNQ13702 412 aa14□□□□□ -0.17
SRP54-202ENST00000546080 IHHQ14623 411 aa14□□□□□ -0.17
SRP54-202ENST00000546080 NPTX1Q15818 432 aa14□□□□□ -0.17
SRP54-202ENST00000546080 CATSPEREQ5SY80 951 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ARTNQ5T4W7 220 aa14□□□□□ -0.17
SRP54-202ENST00000546080 CYP20A1Q6UW02 462 aa14□□□□□ -0.17
SRP54-202ENST00000546080 LACC1Q8IV20 430 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ARL10Q8N8L6 244 aa14□□□□□ -0.17
SRP54-202ENST00000546080 DCBLD1Q8N8Z6 715 aa14□□□□□ -0.17
SRP54-202ENST00000546080 SETD9Q8NE22 299 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ZNF548Q8NEK5 533 aaPredicted RBP14□□□□□ -0.17
SRP54-202ENST00000546080 OR13C4Q8NGS5 318 aa14□□□□□ -0.17
SRP54-202ENST00000546080 OR10A6Q8NH74 314 aa14□□□□□ -0.17
SRP54-202ENST00000546080 RHOXF1Q8NHV9 184 aa14□□□□□ -0.17
SRP54-202ENST00000546080 FUBP1Q96AE4 644 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 HMCESQ96FZ2 354 aa14□□□□□ -0.17
SRP54-202ENST00000546080 TXNDC15Q96J42 360 aa14□□□□□ -0.17
SRP54-202ENST00000546080 THUMPD3Q9BV44 507 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 C1QTNF3Q9BXJ4 246 aa14□□□□□ -0.17
SRP54-202ENST00000546080 NOL6Q9H6R4 1146 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 ELP3Q9H9T3 547 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ABCB10Q9NRK6 738 aa14□□□□□ -0.17
SRP54-202ENST00000546080 GALPQ9UBC7 116 aa14□□□□□ -0.17
SRP54-202ENST00000546080 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14□□□□□ -0.17
SRP54-202ENST00000546080 PCDHGA10Q9Y5H3 936 aa14□□□□□ -0.17
SRP54-202ENST00000546080 HS3ST4Q9Y661 456 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ISPDA4D126 451 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 M0QX08 132 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 PSMD11O00231 422 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 PRMT5O14744 637 aaPredicted RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 PRKD3O94806 890 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 ZBTB7AO95365 584 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 FTH1P02794 183 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 MSH3P20585 1137 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 TCEA1P23193 301 aaKnown RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 FMO4P31512 558 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 FMO3P31513 532 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 EIF2DP41214 584 aaKnown RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 CLCA4Q14CN2 919 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 TRIP4Q15650 581 aaPredicted RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 Q6ZSR9 355 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 PRSS48Q7RTY5 328 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 TMEM179BQ7Z7N9 219 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 DCP2Q8IU60 420 aaKnown RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 FBLIM1Q8WUP2 373 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 ESAMQ96AP7 390 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 SLIRPQ9GZT3 109 aaKnown RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 SMOC2Q9H3U7 446 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 SCN3BQ9NY72 215 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 VAPAQ9P0L0 249 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 NEUROG3Q9Y4Z2 214 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 BRCA1P38398 1863 aaKnown RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 COL4A4P53420 1690 aaPredicted RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 ELOVL7A1L3X0 281 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 CXCR6O00574 342 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 ASNA1O43681 348 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 UPK1BO75841 260 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 PRSS56P0CW18 603 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 ITGAMP11215 1152 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 ACVR2AP27037 513 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 PCSK1P29120 753 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 FPGSQ05932 587 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 CYP4F3Q08477 520 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 NR6A1Q15406 480 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 CARTPTQ16568 116 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 DALRD3Q5D0E6 543 aaKnown RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 SYT6Q5T7P8 510 aaPredicted RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 B3GNT8Q7Z7M8 397 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 HIPK1Q86Z02 1210 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 LGI2Q8N0V4 545 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 NUDT8Q8WV74 236 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 DNAJB3Q8WWF6 145 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 CAPSLQ8WWF8 208 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 NCLNQ969V3 563 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 CDK15Q96Q40 435 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 ABCC13Q9NSE7 274 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 EIF2B4Q9UI10 523 aaKnown RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 TMEFF2Q9UIK5 374 aaPredicted RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 POLR3HQ9Y535 204 aaPredicted RBP13.99□□□□□ -0.17
SRP54-202ENST00000546080 U3KQV3 271 aa13.99□□□□□ -0.17
SRP54-202ENST00000546080 SMIM35A0A1B0GVV1 85 aa13.98□□□□□ -0.17
SRP54-202ENST00000546080 LOC285095A0A1B0GVY8 99 aa13.98□□□□□ -0.17
SRP54-202ENST00000546080 WASH4PA8MWX3 477 aa13.98□□□□□ -0.17
SRP54-202ENST00000546080 SNPHO15079 494 aa13.98□□□□□ -0.17
SRP54-202ENST00000546080 FADS2O95864 444 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms