RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CDH7Q9ULB5 785 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 SH3PXD2BA1X283 911 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 VWA8A3KMH1 1905 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 SLC38A8A6NNN8 435 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 TMEM189-UBE2V1I3L0A0 370 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 SYN3O14994 580 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 CD160O95971 181 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 HNRNPCP07910 306 aaKnown RBP eCLIP15.55■□□□□ 0.081e-7■■■□□ 17.1
LDLR-204ENST00000545707 ANXA6P08133 673 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ZDHHC11BP0C7U3 371 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ALDH3A2P51648 485 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 DAG1Q14118 895 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 FXNQ16595 210 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 GTDC1Q4AE62 458 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ATXN7L2Q5T6C5 722 aaPredicted RBP15.55■□□□□ 0.08
LDLR-204ENST00000545707 FAM117BQ6P1L5 589 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 SBSNQ6UWP8 590 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 KRTCAP2Q8N6L1 136 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 LKAAEAR1Q8TD35 194 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 DOK1Q99704 481 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 APOL5Q9BWW9 433 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 EXD2Q9NVH0 621 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 LIMD1Q9UGP4 676 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 DNMT3LQ9UJW3 386 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 GMEB1Q9Y692 573 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ZNF701M0R085 212 aaPredicted RBP15.55■□□□□ 0.08
LDLR-204ENST00000545707 DEAF1O75398 565 aaPredicted RBP15.55■□□□□ 0.08
LDLR-204ENST00000545707 THRBP10828 461 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ELNP15502 786 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 PRKACGP22612 351 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 PSMD7P51665 324 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ARF5P84085 180 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 CHRNB3Q05901 458 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ILF2Q12905 390 aaKnown RBP15.55■□□□□ 0.08
LDLR-204ENST00000545707 GPR17Q13304 367 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 FAM174BQ3ZCQ3 159 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 FAM98BQ52LJ0 330 aaKnown RBP15.55■□□□□ 0.08
LDLR-204ENST00000545707 FAM151BQ6UXP7 276 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 MILR1Q7Z6M3 343 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 PHACTR4Q8IZ21 702 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 PDPRQ8NCN5 879 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 GIPC3Q8TF64 312 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 SNX19Q92543 992 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 MTFMTQ96DP5 389 aaKnown RBP15.55■□□□□ 0.08
LDLR-204ENST00000545707 CIPCQ9C0C6 399 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 RRAGCQ9HB90 399 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 PFDN4Q9NQP4 134 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ARIH1Q9Y4X5 557 aaPredicted RBP15.55■□□□□ 0.08
LDLR-204ENST00000545707 ST14Q9Y5Y6 855 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ANKRD36A6QL64 1941 aa15.55■□□□□ 0.08
LDLR-204ENST00000545707 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 A8MX80 341 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 J3QRK9 145 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 KCNH1O95259 989 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 RAP2AP10114 183 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 GGT1P19440 569 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 UGT1A1P22309 533 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 UGT1A4P22310 534 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 HMOX2P30519 316 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 UGT1A3P35503 534 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 UGT1A5P35504 534 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 PIGAP37287 484 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 SLC11A2P49281 568 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 ZNF177Q13360 481 aaPredicted RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 PWP1Q13610 501 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 MEP1AQ16819 746 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 CCSAPQ6IQ19 270 aaPredicted RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 ANKRD26P1Q6NSI1 321 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 R3HCC1LQ7Z5L2 792 aaKnown RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 OR2T12Q8NG77 320 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 SLC22A17Q8WUG5 538 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 FBXL8Q96CD0 374 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 ADGRE2Q9UHX3 823 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 OR6C75A6NL08 312 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 GSTA4O15217 222 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 TAPBPO15533 448 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 FFAR2O15552 330 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 CORO1AP31146 461 aaKnown RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 PTGER3P43115 390 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 NAA20P61599 178 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 TRAF3Q13114 568 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 C5orf22Q49AR2 442 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 SULT1C3Q6IMI6 304 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 OR13F1Q8NGS4 319 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 ZNF420Q8TAQ5 688 aaPredicted RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 GFM2Q969S9 779 aaKnown RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 ADGRE3Q9BY15 652 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 GPR63Q9BZJ6 419 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 LHPPQ9H008 270 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 P2RY12Q9H244 342 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 C8orf4Q9NR00 106 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 SLC6A13Q9NSD5 602 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 MARCH5Q9NX47 278 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 VPS9D1Q9Y2B5 631 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 FCF1Q9Y324 198 aaKnown RBP15.54■□□□□ 0.08
LDLR-204ENST00000545707 DHRS7Q9Y394 339 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 PCDHGA8Q9Y5G5 932 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 PRSS21Q9Y6M0 314 aa15.54■□□□□ 0.08
LDLR-204ENST00000545707 MANSC4A6NHS7 340 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms