RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PPP4R1Q8TF05 950 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 RELTQ969Z4 430 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 IP6K3Q96PC2 410 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 TRIB3Q96RU7 358 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 INSM2Q96T92 566 aaPredicted RBP9.13□□□□□ -0.95
CHD4-212ENST00000545083 NRTNQ99748 197 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 SLX1AQ9BQ83 275 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 DHRS4Q9BTZ2 278 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 POMT2Q9UKY4 750 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 PTRH2Q9Y3E5 179 aaKnown RBP9.13□□□□□ -0.95
CHD4-212ENST00000545083 A0A1W2PQJ5 194 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 C9J4A7 227 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 PEX12O00623 359 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 AURKAO14965 403 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 GPR39O43194 453 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 ZNF749O43361 778 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 ALOX12BO75342 701 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 POP7O75817 140 aaKnown RBP9.12□□□□□ -0.95
CHD4-212ENST00000545083 UMODP07911 640 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 CD48P09326 243 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 ST6GAL1P15907 406 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 VCLP18206 1134 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 CDH3P22223 829 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 HTR1EP28566 365 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 PCK1P35558 622 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 HADHAP40939 763 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 KCNK10P57789 538 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 BECN1Q14457 450 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 ZNF630Q2M218 657 aaPredicted RBP9.12□□□□□ -0.95
CHD4-212ENST00000545083 ATP13A5Q4VNC0 1218 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 BOLA3Q53S33 107 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 ZFYVE27Q5T4F4 411 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 NCBP2-AS2Q69YL0 99 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 IGFL2Q6UWQ7 119 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 BNC2Q6ZN30 1099 aaPredicted RBP9.12□□□□□ -0.95
CHD4-212ENST00000545083 AMZ2Q86W34 360 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 LRRC49Q8IUZ0 686 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 PARP9Q8IXQ6 854 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 CARFQ8N187 725 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 CNTD1Q8N815 330 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 RASGEF1AQ8N9B8 481 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 SPDYE1Q8NFV5 336 aaPredicted RBP9.12□□□□□ -0.95
CHD4-212ENST00000545083 DNAJB14Q8TBM8 379 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 FANCEQ9HB96 536 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 AMACRQ9UHK6 382 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 SLC24A2Q9UI40 661 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 PADI2Q9Y2J8 665 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 ZNF711Q9Y462 761 aa9.12□□□□□ -0.95
CHD4-212ENST00000545083 ZNF469Q96JG9 3925 aaPredicted RBP9.12□□□□□ -0.95
CHD4-212ENST00000545083 CCDC88CQ9P219 2028 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 PRICKLE3O43900 615 aaPredicted RBP9.11□□□□□ -0.95
CHD4-212ENST00000545083 KLHL41O60662 606 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 KCNJ13O60928 360 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 JRKO75564 520 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 COX6B1P14854 86 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 PVRP15151 417 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 AGXTP21549 392 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 CCNCP24863 283 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 FOLR3P41439 243 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 PREPP48147 710 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 TDGF1P3P51864 188 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 OTUD4Q01804 1114 aaKnown RBP9.11□□□□□ -0.95
CHD4-212ENST00000545083 SLC25A11Q02978 314 aaKnown RBP9.11□□□□□ -0.95
CHD4-212ENST00000545083 CDC16Q13042 620 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 XRCC4Q13426 336 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 GTF2H3Q13889 308 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 ZNF169Q14929 603 aaPredicted RBP9.11□□□□□ -0.95
CHD4-212ENST00000545083 SLC9A5Q14940 896 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 PAFAH1B3Q15102 231 aaKnown RBP9.11□□□□□ -0.95
CHD4-212ENST00000545083 C1orf189Q5VU69 101 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 CDKAL1Q5VV42 579 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 ARMC6Q6NXE6 501 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 B4GALNT4Q76KP1 1039 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 IRF2BP2Q7Z5L9 587 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 NEK11Q8NG66 645 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 OR2Y1Q8NGV0 311 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 GDAP1Q8TB36 358 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 NAT14Q8WUY8 206 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 CCDC120Q96HB5 630 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 CNDP1Q96KN2 507 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 TSGA13Q96PP4 275 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 GBP5Q96PP8 586 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 VPS35Q96QK1 796 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 DPH2Q9BQC3 489 aaPredicted RBP9.11□□□□□ -0.95
CHD4-212ENST00000545083 GPR63Q9BZJ6 419 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 KLHL25Q9H0H3 589 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 WWP1Q9H0M0 922 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 BPIFA1Q9NP55 256 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 ATP13A2Q9NQ11 1180 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 C1GALT1Q9NS00 363 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 CDYLQ9Y232 598 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 SPO11Q9Y5K1 396 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 DOCK10Q96BY6 2186 aa9.11□□□□□ -0.95
CHD4-212ENST00000545083 OR2AG2A6NM03 316 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 E7EQ34 232 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 H3BMH7 237 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 HCRTR1O43613 425 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 IGHEP01854 428 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 CTSBP07858 339 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 MSL3P1P0C860 447 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms