RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 LTA4HP09960 611 aaKnown RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 SLC35E2BP0CK96 405 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 ENO3P13929 434 aaPredicted RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 DGKAP23743 735 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 CD27P26842 260 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 HPDP32754 393 aaPredicted RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 IGFALSP35858 605 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 ABCG1P45844 678 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 PRLHRP49683 370 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 THOP1P52888 689 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 RPL6Q02878 288 aaKnown RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 PDE1CQ14123 709 aaPredicted RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 CCDC153Q494R4 210 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 WDR45BQ5MNZ6 344 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 CTSL3PQ5NE16 218 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 PLEKHS1Q5SXH7 462 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 ABI3BPQ7Z7G0 1075 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 CMC1Q7Z7K0 106 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 ADGRG6Q86SQ4 1221 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 LRRTM4Q86VH4 590 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 IQCHQ86VS3 1027 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 C4orf33Q8N1A6 199 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 ZBTB2Q8N680 514 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 CLDN19Q8N6F1 224 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 BANPQ8N9N5 519 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 PLA2G15Q8NCC3 412 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 CEP76Q8TAP6 659 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 MDM1Q8TC05 714 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 SREK1Q8WXA9 508 aaKnown RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 KLK6Q92876 244 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 BIRC7Q96CA5 298 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 PDLIM5Q96HC4 596 aaKnown RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 LINC00615Q96LM1 132 aaPredicted RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 UBL7Q96S82 380 aaPredicted RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 GPR21Q99679 349 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 SELENOSQ9BQE4 189 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 CCM2Q9BSQ5 444 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 BOCQ9BWV1 1114 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 GTPBP2Q9BX10 602 aaKnown RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 OR2AG1Q9H205 316 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 MBNL1Q9NR56 388 aaKnown RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 TMEM74BQ9NUR3 256 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 PCMTD2Q9NV79 361 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 DKK4Q9UBT3 224 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 SLC6A14Q9UN76 642 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.36□□□□□ -0.91
YBX3-215ENST00000544504 PLXND1Q9Y4D7 1925 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 TMEM120BA0PK00 339 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 H3BQF6 201 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 GOLGA8RI6L899 631 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 LIN7AO14910 233 aaPredicted RBP9.35□□□□□ -0.91
YBX3-215ENST00000544504 CHUKO15111 745 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 KMOO15229 486 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 RAD51BO15315 384 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 PHGDHO43175 533 aaKnown RBP9.35□□□□□ -0.91
YBX3-215ENST00000544504 TYROBPO43914 113 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 NUAK1O60285 661 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 NIPSNAP2O75323 286 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 KLHL2O95198 593 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 CFIP05156 583 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 RBP1P09455 135 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 ZNF37AP17032 561 aaPredicted RBP9.35□□□□□ -0.91
YBX3-215ENST00000544504 CSRP3P50461 194 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 CLCN7P51798 805 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 CDKN2DP55273 166 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 PFN3P60673 137 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 B4GALNT1Q00973 533 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 ASPHQ12797 758 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 RPA4Q13156 261 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 NFATC4Q14934 902 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 TRIP6Q15654 476 aaKnown RBP9.35□□□□□ -0.91
YBX3-215ENST00000544504 SYTL3Q4VX76 610 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 TMEM220Q6QAJ8 160 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 KDM7AQ6ZMT4 941 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 SH2D5Q6ZV89 423 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 NEK10Q6ZWH5 1172 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 RABEPKQ7Z6M1 372 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 CLEC14AQ86T13 490 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 TRAPPC5Q8IUR0 188 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 CEP97Q8IW35 865 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 TMEFF1Q8IYR6 380 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 RASGEF1AQ8N9B8 481 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 MFSD2AQ8NA29 543 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 TMEM145Q8NBT3 493 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 RDH11Q8TC12 318 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 HM13Q8TCT9 377 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 CD200R1Q8TD46 325 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 RLN3Q8WXF3 142 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 SNX19Q92543 992 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 FUBP1Q96AE4 644 aaKnown RBP9.35□□□□□ -0.91
YBX3-215ENST00000544504 TMEM159Q96B96 161 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 SGF29Q96ES7 293 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 UBXN10Q96LJ8 280 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 WDR92Q96MX6 357 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 OLFM1Q99784 485 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 SLC13A1Q9BZW2 595 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 DERL2Q9GZP9 239 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 CAB39LQ9H9S4 337 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms