RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ABHD2P08910 425 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SAT1P21673 171 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 AOAHP28039 575 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PREPP48147 710 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RPIAP49247 311 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 DAB2P98082 770 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PLOD1Q02809 727 aaPredicted RBP14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MAP9Q49MG5 647 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RBM20Q5T481 1227 aaKnown RBP14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GRTP1Q5TC63 336 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 HECTD2Q5U5R9 776 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FAM45BPQ6NSW5 357 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 UGT3A1Q6NUS8 523 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SFTPA2Q8IWL1 248 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 NAGSQ8N159 534 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KYQ8NBH2 561 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FAM45AQ8TCE6 357 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MAPK15Q8TD08 544 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PATE1Q8WXA2 126 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KCNJ9Q92806 393 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 VPS39Q96JC1 886 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ELMO2Q96JJ3 720 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RBBP8Q99708 897 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 WWP1Q9H0M0 922 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC32A1Q9H598 525 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 EVA1BQ9NVM1 165 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TAS2R13Q9NYV9 303 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 EXOC1LA0A1B0GW35 172 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FAM95CA0A1B0GW59 222 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 OR5K4A6NMS3 321 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 IFRD1O00458 451 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MYF5P13349 255 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PDHA2P29803 388 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SPRP35270 261 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC12A2P55011 1212 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ILF2Q12905 390 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RPA4Q13156 261 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 NR0B2Q15466 257 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ZNF658BQ4V348 819 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 C14orf28Q4W4Y0 310 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 AGAP9Q5VTM2 703 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 OGFOD3Q6PK18 319 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ABRAXAS1Q6UWZ7 409 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 WASH2PQ6VEQ5 465 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TRIM48Q8IWZ4 208 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC35F3Q8IY50 421 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ZBTB2Q8N680 514 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FAM181AQ8N9Y4 354 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SIDT2Q8NBJ9 832 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SKA2Q8WVK7 121 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GPR21Q99679 349 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 WASH6PQ9NQA3 447 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 NCKIPSDQ9NZQ3 722 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SCHIP1Q9P0W5 487 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GALPQ9UBC7 116 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TRMT6Q9UJA5 497 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 WDR37Q9Y2I8 494 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 VWA7Q9Y334 891 aa14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RIF1Q5UIP0 2472 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ARID1BQ8NFD5 2236 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 COL5A1P20908 1838 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KIR2DS5A0A0G2JLQ3 304 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 A0A0G2JNG1 304 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC5A10A0PJK1 596 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 A6NCN8 305 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KIR2DS3K7RE56 304 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC30A4O14863 429 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 NOBOXO60393 691 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 INHBAP08476 426 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 BRAFP15056 766 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SDHBP21912 280 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MSH2P43246 934 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CLCN7P51798 805 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CDKN2DP55273 166 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MAZP56270 477 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KIR2DS5Q14953 304 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CLCA4Q14CN2 919 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RSPO4Q2I0M5 234 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TTLL9Q3SXZ7 439 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PLEKHS1Q5SXH7 462 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 IYDQ6PHW0 289 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC9B2Q86UD5 537 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 DEFB124Q8NES8 71 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GPR156Q8NFN8 814 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC37A2Q8TED4 501 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CAVIN3Q969G5 261 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CXorf40BQ96DE9 158 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 C12orf66Q96MD2 445 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PAFAH2Q99487 392 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CDC6Q99741 560 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CCDC77Q9BR77 488 aa14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 STN1Q9H668 368 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 IMP3Q9NV31 184 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TSR3Q9UJK0 312 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CFAP20Q9Y6A4 193 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CPED1A4D0V7 1026 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 OR52A4PA6NMU1 304 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ERLIN1O75477 346 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 HSD17B3P37058 310 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms