RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SLC35G4P0C7Q5 338 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 TYRP1P17643 537 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 MGAT1P26572 445 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 MAPK9P45984 424 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 CAPZBP47756 277 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 VPS41P49754 854 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 GNG11P61952 73 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 TLE3Q04726 772 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 RPA4Q13156 261 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 SEMA3AQ14563 771 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 CAND1Q86VP6 1230 aaKnown RBP15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 SPACA3Q8IXA5 215 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 BMPERQ8N8U9 685 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 MCUQ8NE86 351 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 OR6P1Q8NGX9 317 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 RAB33BQ9H082 229 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 OR52A5Q9H2C5 316 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 COG4Q9H9E3 785 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 KCND1Q9NSA2 647 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 SYBUQ9NX95 663 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 FAM8A1Q9UBU6 413 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 EPHA6Q9UF33 1036 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 PCDHGA3Q9Y5H0 932 aa15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 CFAP20Q9Y6A4 193 aaKnown RBP15.1■□□□□ 0.01
ECHDC2-223ENST00000542552 ATMQ13315 3056 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 SMG1Q96Q15 3661 aaKnown RBP15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 GOLGA6L10A0A0M3HER8 536 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 B4E171 279 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 AGRPO00253 132 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 QSOX1O00391 747 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 FANCGO15287 622 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 TOX3O15405 576 aaPredicted RBP15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 OR1I1O60431 355 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 PRAMEF10O60809 474 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 AVILO75366 819 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 TMEM63AO94886 807 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 POLBP06746 335 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 MLNP12872 115 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 NMBRP28336 390 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 CSTF2P33240 577 aaKnown RBP eCLIP15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 TSPAN7P41732 249 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 ABCG1P45844 678 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 CD151P48509 253 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 MAPK10P53779 464 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 GFERP55789 205 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 PRAMEP78395 509 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 SARNPP82979 210 aaKnown RBP15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 FASTKD1Q53R41 847 aaKnown RBP15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 CREG2Q8IUH2 290 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 GRK7Q8WTQ7 553 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 KCNE4Q8WWG9 221 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 RSC1A1Q92681 617 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 SLCO2A1Q92959 643 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 USP7Q93009 1102 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 C9orf72Q96LT7 481 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 C12orf66Q96MD2 445 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 TTC1Q99614 292 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 IMP3Q9NV31 184 aaKnown RBP15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 OCIAD1Q9NX40 245 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 FOXJ2Q9P0K8 574 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 MARCH4Q9P2E8 410 aaPredicted RBP15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 SOX13Q9UN79 622 aa15.09■□□□□ 0.01
ECHDC2-223ENST00000542552 A8MU76 341 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 CD3EAPO15446 510 aaKnown RBP15.08■□□□□ 0
ECHDC2-223ENST00000542552 CAPN5O15484 640 aaPredicted RBP15.08■□□□□ 0
ECHDC2-223ENST00000542552 FTH1P02794 183 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 AMD1P17707 334 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 ARNTP27540 789 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 PDHA2P29803 388 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 PPM1FP49593 454 aaPredicted RBP15.08■□□□□ 0
ECHDC2-223ENST00000542552 MC2RQ01718 297 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 CLN3Q13286 438 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 SNAP47Q5SQN1 464 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 DUS1LQ6P1R4 473 aaKnown RBP15.08■□□□□ 0
ECHDC2-223ENST00000542552 JAMLQ86YT9 394 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 NAT8LQ8N9F0 302 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 NAF1Q96HR8 494 aaKnown RBP15.08■□□□□ 0
ECHDC2-223ENST00000542552 TAAR9Q96RI9 348 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 NAPGQ99747 312 aaPredicted RBP15.08■□□□□ 0
ECHDC2-223ENST00000542552 DDA1Q9BW61 102 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 ZMYND15Q9H091 742 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 KIR3DX1Q9H7L2 352 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 CATSPERZQ9NTU4 200 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 SEMA5BQ9P283 1151 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 PCYOX1Q9UHG3 505 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 SLC24A2Q9UI40 661 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 LHX6Q9UPM6 363 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 HEBP2Q9Y5Z4 205 aa15.08■□□□□ 0
ECHDC2-223ENST00000542552 SDK2Q58EX2 2172 aa15.07■□□□□ 0
ECHDC2-223ENST00000542552 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.07■□□□□ 0
ECHDC2-223ENST00000542552 LIN7AO14910 233 aaPredicted RBP15.07■□□□□ 0
ECHDC2-223ENST00000542552 KLK10O43240 276 aa15.07■□□□□ 0
ECHDC2-223ENST00000542552 OR56A5P0C7T3 313 aa15.07■□□□□ 0
ECHDC2-223ENST00000542552 NDUFS1P28331 727 aa15.07■□□□□ 0
ECHDC2-223ENST00000542552 PPARGP37231 505 aaPredicted RBP15.07■□□□□ 0
ECHDC2-223ENST00000542552 MAGEA3P43357 314 aa15.07■□□□□ 0
ECHDC2-223ENST00000542552 PREPP48147 710 aa15.07■□□□□ 0
ECHDC2-223ENST00000542552 LEPRP48357 1165 aaKnown RBP15.07■□□□□ 0
ECHDC2-223ENST00000542552 ARCN1P48444 511 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms