RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 SOX13Q9UN79 622 aa19.64■□□□□ 0.73
CACNA2D4-215ENST00000542340 PRSS21Q9Y6M0 314 aa19.64■□□□□ 0.73
CACNA2D4-215ENST00000542340 MN1Q10571 1320 aaPredicted RBP19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 F8W8V4 182 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 NVLO15381 856 aaKnown RBP19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 AVILO75366 819 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 KRT37O76014 449 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 TMEM63AO94886 807 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 FTH1P02794 183 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 TYRP1P17643 537 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 ITIH1P19827 911 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 NMBRP28336 390 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 CSTF2P33240 577 aaKnown RBP eCLIP19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 PPP1R7Q15435 360 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 ZNF449Q6P9G9 518 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 SPDYE1Q8NFV5 336 aaPredicted RBP19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 GPR150Q8NGU9 434 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 CAPZA3Q96KX2 299 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 B3GNT4Q9C0J1 378 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 DDX47Q9H0S4 455 aaKnown RBP19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 XAB2Q9HCS7 855 aaKnown RBP19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 CATSPERZQ9NTU4 200 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 HEBP2Q9Y5Z4 205 aa19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 CFAP20Q9Y6A4 193 aaKnown RBP19.63■□□□□ 0.73
CACNA2D4-215ENST00000542340 CELSR3Q9NYQ7 3312 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 MAGEB16A2A368 324 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 AGRPO00253 132 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 CD3EAPO15446 510 aaKnown RBP19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 OR1I1O60431 355 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 C9P02748 559 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 OR56A5P0C7T3 313 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 CCL4P13236 92 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 NDUFS1P28331 727 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 SLC5A2P31639 672 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 ETV5P41161 510 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 CD151P48509 253 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 SEMA3AQ14563 771 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 MPP5Q8N3R9 675 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 NAT8LQ8N9F0 302 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 HNRNPLLQ8WVV9 542 aaKnown RBP19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 MFSD3Q96ES6 412 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 RMDN2Q96LZ7 410 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 RAB33BQ9H082 229 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 OR52A5Q9H2C5 316 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 RNF14Q9UBS8 474 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 EPHA6Q9UF33 1036 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 ACSL6Q9UKU0 697 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 COLEC10Q9Y6Z7 277 aa19.62■□□□□ 0.73
CACNA2D4-215ENST00000542340 SDR42E2A6NKP2 422 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 LIN7AO14910 233 aaPredicted RBP19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 FGF3P11487 239 aaPredicted RBP19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 PAFAH1B1P43034 410 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 CAPZBP47756 277 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 TTPAP49638 278 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 MAPK10P53779 464 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 PTK6Q13882 451 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 SNAP47Q5SQN1 464 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 TMEM164Q5U3C3 297 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 KLHL35Q6PF15 583 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 JAMLQ86YT9 394 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 PPIL6Q8IXY8 311 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 USP7Q93009 1102 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 C9orf72Q96LT7 481 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 SERPINB12Q96P63 405 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 DPH1Q9BZG8 443 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 KIR3DX1Q9H7L2 352 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 SAMD15Q9P1V8 674 aa19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 MARCH4Q9P2E8 410 aaPredicted RBP19.61■□□□□ 0.73
CACNA2D4-215ENST00000542340 A8MU76 341 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 IFRD1O00458 451 aaPredicted RBP19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 FANCGO15287 622 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 TOX3O15405 576 aaPredicted RBP19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 CAPN5O15484 640 aaPredicted RBP19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 VAPBO95292 243 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 ANKRD34CP0C6C1 535 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 PDHA2P29803 388 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 PTGIRP43119 386 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 ABCG1P45844 678 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 GFERP55789 205 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 PLOD1Q02809 727 aaPredicted RBP19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 DUS1LQ6P1R4 473 aaKnown RBP19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 CASC4Q6P4E1 433 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 CES3Q6UWW8 571 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 KCNE4Q8WWG9 221 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 RSC1A1Q92681 617 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 ZDHHC12Q96GR4 267 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 RUNDC3BQ96NL0 473 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 TAAR9Q96RI9 348 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 SLC24A2Q9UI40 661 aa19.6■□□□□ 0.73
CACNA2D4-215ENST00000542340 FAM237BA0A1B0GVD1 139 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 B4E171 279 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 C9orf172C9J069 976 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 GOLGA8MH3BSY2 632 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 CCDC188H7C350 402 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 PRMT5O14744 637 aaPredicted RBP19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 PAMP19021 973 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 ARNTP27540 789 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 ITPKBP27987 946 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 TSPAN7P41732 249 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 MAGEA3P43357 314 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms