RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.55□□□□□ -1.04
THBS3-210ENST00000541576 ANKRD12Q6UB98 2062 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 NPEPPSL1A6NEC2 478 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 IGLON5A6NGN9 336 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 A8MT66 165 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 K7ESM1 405 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 CDC7O00311 574 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 MAN2B1O00754 1011 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 MAP3K7O43318 606 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 KERAO60938 352 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 TM7SF2O76062 418 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 IPO13O94829 963 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 AP2A2O94973 939 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 CHRNGP07510 517 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 DGKAP23743 735 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 TPP2P29144 1249 aaPredicted RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 VHLP40337 213 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 TSNQ15631 228 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 MLF2Q15773 248 aaPredicted RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 ACSBG2Q5FVE4 666 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 NLRP8Q86W28 1048 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 SLC22A9Q8IVM8 553 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 PELI3Q8N2H9 469 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 SIPA1Q96FS4 1042 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 PDLIM5Q96HC4 596 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 ATOH8Q96SQ7 321 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 KCTD5Q9NXV2 234 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 RNF112Q9ULX5 631 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 SCML1Q9UN30 329 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 DUSP12Q9UNI6 340 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 SYCE1LA8MT33 242 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 HSPA4LO95757 839 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 SOD1P00441 154 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 MTHFD2P13995 350 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 DNAJB13P59910 316 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 ZNF648Q5T619 568 aaPredicted RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 IZUMO2Q6UXV1 221 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 LRRC74BQ6ZQY2 392 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 TRIM67Q6ZTA4 783 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 PIWIL4Q7Z3Z4 852 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 LSMEM2Q8N112 164 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 EFCAB3Q8N7B9 438 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 CCNYL1Q8N7R7 359 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 CCDC124Q96CT7 223 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 PHF21BQ96EK2 531 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 LATS2Q9NRM7 1088 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 CHCHD3Q9NX63 227 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 NCKIPSDQ9NZQ3 722 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 KLHL42Q9P2K6 505 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 LRRC42Q9Y546 428 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 UBXN8O00124 270 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 QSOX1O00391 747 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 OR6B1O95007 311 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 PGM3O95394 542 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 CCR7P32248 378 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 TMEM115Q12893 351 aaPredicted RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 CRY1Q16526 586 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 ARL13AQ5H913 290 aaPredicted RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 ZNF852Q6ZMS4 543 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 RPS27LQ71UM5 84 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 MYO1HQ8N1T3 1032 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 OR14C36Q8NHC7 312 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 FUBP1Q96AE4 644 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 FAM131CQ96AQ9 280 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 SLC7A6OSQ96CW6 309 aaPredicted RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 TMEM120AQ9BXJ8 343 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 DRC3Q9H069 523 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 HEY2Q9UBP5 337 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 CNOT6Q9ULM6 557 aaKnown RBP8.54□□□□□ -1.04
THBS3-210ENST00000541576 MMP17Q9ULZ9 603 aa8.54□□□□□ -1.04
THBS3-210ENST00000541576 OR2AG2A6NM03 316 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 SUPT3HB4E1H0 165 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 PLRG1O43660 514 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 ATP6V1G1O75348 118 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 SUPT3HO75486 399 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 GFAPP14136 432 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 ARFIP2P53365 341 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 NFKB2Q00653 900 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 SEL1L3Q68CR1 1132 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 TMEM92Q6UXU6 159 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 MAVSQ7Z434 540 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 ZNF781Q8N8C0 355 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 PTGR2Q8N8N7 351 aaPredicted RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 CEP70Q8NHQ1 597 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 PIWIL2Q8TC59 973 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 MIPEPQ99797 713 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 ZCCHC2Q9C0B9 1178 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 ARL8BQ9NVJ2 186 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 CA14Q9ULX7 337 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 PRR23AA6NEV1 266 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 ZNF195O14628 629 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 SGTAO43765 313 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 FTH1P02794 183 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 ENO1P06733 434 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 CBSLP0DN79 551 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 T-ENOLP0DO92 83 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 ACADMP11310 421 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 ESRRAP11474 423 aaPredicted RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 AOAHP28039 575 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms