RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PKMP14618 531 aaKnown RBP18.39■□□□□ 0.53
VPS33A-205ENST00000541169 STX2P32856 288 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 PHBP35232 272 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 SKIV2L2P42285 1042 aaKnown RBP18.39■□□□□ 0.53
VPS33A-205ENST00000541169 SLC1A2P43004 574 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 GPLD1P80108 840 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 DNAJC3Q13217 504 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 CTBP1Q13363 440 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 TRADDQ15628 312 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 ZNF658BQ4V348 819 aaPredicted RBP18.39■□□□□ 0.53
VPS33A-205ENST00000541169 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.39■□□□□ 0.53
VPS33A-205ENST00000541169 GUSBP11Q6P575 273 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 OTOAQ7RTW8 1153 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 LDB1Q86U70 411 aaPredicted RBP18.39■□□□□ 0.53
VPS33A-205ENST00000541169 TMPRSS12Q86WS5 348 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 CNPY4Q8N129 248 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 SLC37A2Q8TED4 501 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 KCNJ9Q92806 393 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 WDR83Q9BRX9 315 aaKnown RBP18.39■□□□□ 0.53
VPS33A-205ENST00000541169 CAAP1Q9H8G2 361 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 PRSS21Q9Y6M0 314 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 E5RI56 91 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 SLU7O95391 586 aaKnown RBP18.38■□□□□ 0.53
VPS33A-205ENST00000541169 RPN2P04844 631 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 CD9P21926 228 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 RPL10P27635 214 aaKnown RBP18.38■□□□□ 0.53
VPS33A-205ENST00000541169 AOAHP28039 575 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 ATP5DP30049 168 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 MAPK9P45984 424 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 SQSTM1Q13501 440 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 NAB1Q13506 487 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 FASTKD3Q14CZ7 662 aaKnown RBP18.38■□□□□ 0.53
VPS33A-205ENST00000541169 TTLL9Q3SXZ7 439 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 PLEKHS1Q5SXH7 462 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 TEDDM1Q5T9Z0 273 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 CAPRIN2Q6IMN6 1127 aaKnown RBP18.38■□□□□ 0.53
VPS33A-205ENST00000541169 DENND6AQ8IWF6 608 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 CCDC74AQ96AQ1 378 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 SLC38A3Q99624 504 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 CCDC3Q9BQI4 270 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 TXNDC16Q9P2K2 825 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 CRYL1Q9Y2S2 319 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 RNF215Q9Y6U7 377 aa18.38■□□□□ 0.53
VPS33A-205ENST00000541169 GOLGA4Q13439 2230 aaKnown RBP18.38■□□□□ 0.53
VPS33A-205ENST00000541169 SLC5A10A0PJK1 596 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 LILRA5A6NI73 299 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 TMX2-CTNND1H3BSU7 103 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 OPA1O60313 960 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 SLCO2B1O94956 709 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 RHOXF2BP0C7M4 288 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 MTHFD1P11586 935 aaKnown RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 BRAFP15056 766 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 CHRM3P20309 590 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 FMO4P31512 558 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 CARSP49589 748 aaKnown RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 MAZP56270 477 aaKnown RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 UBE2IP63279 158 aaKnown RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 BOP1Q14137 746 aaKnown RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 SEPT7Q16181 437 aaKnown RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 LRRC8EQ6NSJ5 796 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 KLHL35Q6PF15 583 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 FAM83HQ6ZRV2 1179 aaPredicted RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 SLCO6A1Q86UG4 719 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 PDZD3Q86UT5 571 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 OR10G6Q8NH81 332 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 CCDC97Q96F63 343 aaPredicted RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 RHOXF2Q9BQY4 288 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 WWP1Q9H0M0 922 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 OR52A5Q9H2C5 316 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 MVB12BQ9H7P6 319 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 PLAC1Q9HBJ0 212 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 SLC40A1Q9NP59 571 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 IL1RAPL1Q9NZN1 696 aa18.37■□□□□ 0.53
VPS33A-205ENST00000541169 CNOT1A5YKK6 2376 aaKnown RBP18.37■□□□□ 0.53
VPS33A-205ENST00000541169 EIF3FO00303 357 aaPredicted RBP18.36■□□□□ 0.53
VPS33A-205ENST00000541169 GPC4O75487 556 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 EML2O95834 649 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 KCNA4P22459 653 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 MCM3P25205 808 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 CCR7P32248 378 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 KRT33BQ14525 404 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 CLCA4Q14CN2 919 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 SMAD1Q15797 465 aaKnown RBP18.36■□□□□ 0.53
VPS33A-205ENST00000541169 RPE65Q16518 533 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 SPRED1Q7Z699 444 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 RAB44Q7Z6P3 723 aaPredicted RBP18.36■□□□□ 0.53
VPS33A-205ENST00000541169 SLC22A15Q8IZD6 547 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 C12orf66Q96MD2 445 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 SPTBN4Q9H254 2564 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 LRRC4CQ9HCJ2 640 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 FBXO6Q9NRD1 293 aaPredicted RBP18.36■□□□□ 0.53
VPS33A-205ENST00000541169 TAS2R13Q9NYV9 303 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 ZNF624Q9P2J8 865 aaPredicted RBP18.36■□□□□ 0.53
VPS33A-205ENST00000541169 POLG2Q9UHN1 485 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 WDR37Q9Y2I8 494 aa18.36■□□□□ 0.53
VPS33A-205ENST00000541169 TCRBV9S1A1TA0A576 114 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 PPM1DO15297 605 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 VPS26AO75436 327 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 HAUS5O94927 633 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 AHSGP02765 367 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms