RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 GDF6Q6KF10 455 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 LINGO4Q6UY18 593 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 DET1Q7L5Y6 550 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLCO6A1Q86UG4 719 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 METTL23Q86XA0 190 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZFAND4Q86XD8 727 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF280BQ86YH2 543 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 CCDC117Q8IWD4 279 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 LGI2Q8N0V4 545 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 CADM3Q8N126 398 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 Q8N9G6 341 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 LPCAT1Q8NF37 534 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 RSPH1Q8WYR4 309 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 HPS1Q92902 700 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 BHMTQ93088 406 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 SH3YL1Q96HL8 342 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 ALPK1Q96QP1 1244 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 TFB2MQ9H5Q4 396 aaKnown RBP10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 ITM2CQ9NQX7 267 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 TAS2R13Q9NYV9 303 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 ERVK-18Q9QC07 812 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 KLQ9UEF7 1012 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF639Q9UID6 485 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 PDE10AQ9Y233 779 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC12A8A0AV02 714 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 GSTA4O15217 222 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 COQ9O75208 318 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 MYCLP1P12525 358 aaPredicted RBP10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC2A4P14672 509 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 EFNA1P20827 205 aaPredicted RBP10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 RAD51Q06609 339 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 SFSWAPQ12872 951 aaKnown RBP10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 PRKG2Q13237 762 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 RAPSNQ13702 412 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 SPANXN4Q5MJ08 99 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 CTSL3PQ5NE16 218 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 C10orf120Q5SQS8 335 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 CATSPEREQ5SY80 951 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 GLT6D1Q7Z4J2 308 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 UMODL1-AS1Q8N2C9 162 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 PAPD5Q8NDF8 572 aaKnown RBP10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 OR4F6Q8NGB9 312 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC16A10Q8TF71 515 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 PTPN18Q99952 460 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 NSUN3Q9H649 340 aaKnown RBP10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 CCSER2Q9H7U1 834 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC25A37Q9NYZ2 338 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 CPQQ9Y646 472 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 PMF1-BGLAPU3KQ54 211 aa10.21□□□□□ -0.78
CDC42SE1-207ENST00000540998 DEAF1O75398 565 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 ANXA6P08133 673 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 ENO2P09104 434 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 HTR1EP28566 365 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 HSPA7P48741 367 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 EEFSECP57772 596 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 RPS24P62847 133 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 IL5RAQ01344 420 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC13A2Q13183 592 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 BTG3Q14201 252 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 CTF1Q16619 201 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 ADPRMQ3LIE5 342 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 GPSM1Q86YR5 675 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 MSRB3Q8IXL7 192 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 OR2T12Q8NG77 320 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 APOL5Q9BWW9 433 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 ACTR8Q9H981 624 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 HCSTQ9UBK5 93 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC1A7O00341 560 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 JRKO75564 520 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 UROSP10746 265 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF12P17014 697 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 JAK1P23458 1154 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 FAM189BP81408 668 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 MRPS6P82932 125 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 INAVAQ3KP66 663 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 NADSYN1Q6IA69 706 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 TAS2R42Q7RTR8 314 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 PLEKHH3Q7Z736 793 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 CLDN19Q8N6F1 224 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 OR6K2Q8NGY2 324 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 ELMO1Q92556 727 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 GLMNQ92990 594 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 FAM162AQ96A26 154 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC47A1Q96FL8 570 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 POLR1EQ9GZS1 481 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 HPS4Q9NQG7 708 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 RASSF1Q9NS23 344 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 MTRRQ9UBK8 725 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 PTPRDP23468 1912 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 DICER1Q9UPY3 1922 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 A0A1W2PQ67 120 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 FAM234BA2RU67 622 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRIM64BA6NI03 449 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 FADS2O95864 444 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 CHEK2O96017 543 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF865P0CJ78 1059 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 RAP2AP10114 183 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 RHOQP17081 205 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 MC4RP32245 332 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms