RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 RAB41Q5JT25 222 aa5.52□□□□□ -1.53
YBX3-210ENST00000540975 GCNT6Q5T4J0 391 aa5.52□□□□□ -1.53
YBX3-210ENST00000540975 PLD3Q8IV08 490 aa5.52□□□□□ -1.53
YBX3-210ENST00000540975 OR2T12Q8NG77 320 aa5.52□□□□□ -1.53
YBX3-210ENST00000540975 WBP2Q969T9 261 aa5.52□□□□□ -1.53
YBX3-210ENST00000540975 SAT2Q96F10 170 aaPredicted RBP5.52□□□□□ -1.53
YBX3-210ENST00000540975 CCDC34Q96HJ3 373 aa5.52□□□□□ -1.53
YBX3-210ENST00000540975 FAM81BQ96LP2 452 aa5.52□□□□□ -1.53
YBX3-210ENST00000540975 SUCLA2Q9P2R7 463 aaPredicted RBP5.52□□□□□ -1.53
YBX3-210ENST00000540975 SEC63Q9UGP8 760 aaKnown RBP5.52□□□□□ -1.53
YBX3-210ENST00000540975 ZNF215Q9UL58 517 aaPredicted RBP5.52□□□□□ -1.53
YBX3-210ENST00000540975 RSF1Q96T23 1441 aaPredicted RBP5.51□□□□□ -1.53
YBX3-210ENST00000540975 HHLA1C9JL84 531 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 PLOD2O00469 737 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 TO15178 435 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 H1F0P07305 194 aaKnown RBP5.51□□□□□ -1.53
YBX3-210ENST00000540975 LIFP15018 202 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 PSMC4P43686 418 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 SNRPEP62304 92 aaKnown RBP5.51□□□□□ -1.53
YBX3-210ENST00000540975 ADALQ6DHV7 355 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 INTS8Q75QN2 995 aaKnown RBP5.51□□□□□ -1.53
YBX3-210ENST00000540975 CTCFLQ8NI51 663 aaPredicted RBP5.51□□□□□ -1.53
YBX3-210ENST00000540975 DAZLQ92904 295 aaKnown RBP5.51□□□□□ -1.53
YBX3-210ENST00000540975 ERLEC1Q96DZ1 483 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 TREX2Q9BQ50 279 aaPredicted RBP5.51□□□□□ -1.53
YBX3-210ENST00000540975 ECHDC1Q9NTX5 307 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 NPAP1Q9NZP6 1156 aa5.51□□□□□ -1.53
YBX3-210ENST00000540975 ELOVL7A1L3X0 281 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 A6NCN8 305 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 A6NL46 340 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 CYSRT1A8MQ03 144 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 AGAP14A8MT82 685 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 CLIC2O15247 247 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 WDHD1O75717 1129 aaPredicted RBP5.5□□□□□ -1.53
YBX3-210ENST00000540975 GNB3P16520 340 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 GEMIN4P57678 1058 aaKnown RBP5.5□□□□□ -1.53
YBX3-210ENST00000540975 SIM2Q14190 667 aaPredicted RBP5.5□□□□□ -1.53
YBX3-210ENST00000540975 MELKQ14680 651 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 KIAA1644Q3SXP7 199 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 FAM98BQ52LJ0 330 aaKnown RBP5.5□□□□□ -1.53
YBX3-210ENST00000540975 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 NOTCH2NLQ7Z3S9 236 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 CEP295NLQ96MC4 621 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 TIGD1Q96MW7 591 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 RHNO1Q9BSD3 238 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 GHITMQ9H3K2 345 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 HHATLQ9HCP6 504 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 BLOC1S4Q9NUP1 217 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 TAS2R14Q9NYV8 317 aa5.5□□□□□ -1.53
YBX3-210ENST00000540975 MAGEB17A8MXT2 336 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 PAPSS1O43252 624 aaPredicted RBP5.49□□□□□ -1.53
YBX3-210ENST00000540975 CSPG5O95196 566 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 HSD17B4P51659 736 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 RPS18P62269 152 aaKnown RBP5.49□□□□□ -1.53
YBX3-210ENST00000540975 CREB5Q02930 508 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 KRT33BQ14525 404 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 DUSP28Q4G0W2 176 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 PLEKHS1Q5SXH7 462 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 MFSD6Q6ZSS7 791 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 AACSQ86V21 672 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 SLC47A1Q96FL8 570 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 LRR1Q96L50 414 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 BARD1Q99728 777 aaKnown RBP5.49□□□□□ -1.53
YBX3-210ENST00000540975 CHMP1AQ9HD42 196 aaPredicted RBP5.49□□□□□ -1.53
YBX3-210ENST00000540975 ARHGEF38Q9NXL2 777 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 COQ3Q9NZJ6 369 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 LARSQ9P2J5 1176 aaKnown RBP5.49□□□□□ -1.53
YBX3-210ENST00000540975 PLAGL1Q9UM63 463 aa5.49□□□□□ -1.53
YBX3-210ENST00000540975 ZNF644Q9H582 1327 aaPredicted RBP5.48□□□□□ -1.53
YBX3-210ENST00000540975 PRSS51A0A1B0GVH4 220 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 LNP1A1A4G5 178 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 OR6C76A6NM76 312 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 B4DLN1 442 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 ACP2P11117 423 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 HOXD13P35453 343 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 SLC15A1P46059 708 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 VEGFCP49767 419 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 MRPL12P52815 198 aaKnown RBP5.48□□□□□ -1.53
YBX3-210ENST00000540975 ERVK11-1P61568 191 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 TMF1P82094 1093 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 PMP22Q01453 160 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 MC1RQ01726 317 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 CXCL9Q07325 125 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 PLA2G7Q13093 441 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 FAM120BQ96EK7 910 aaKnown RBP5.48□□□□□ -1.53
YBX3-210ENST00000540975 MOV10L1Q9BXT6 1211 aaKnown RBP5.48□□□□□ -1.53
YBX3-210ENST00000540975 RTN4RQ9BZR6 473 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 KCNK15Q9H427 330 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 SIX2Q9NPC8 291 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 OLFML3Q9NRN5 406 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 HAUS2Q9NVX0 235 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 HACL1Q9UJ83 578 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 KCNJ14Q9UNX9 436 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 KCNK7Q9Y2U2 307 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 SPIN1Q9Y657 262 aaPredicted RBP5.48□□□□□ -1.53
YBX3-210ENST00000540975 SNED1Q8TER0 1413 aa5.48□□□□□ -1.53
YBX3-210ENST00000540975 DISP3Q9P2K9 1392 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 A0A1W2PQ09 198 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 MED19A0JLT2 244 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms