RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SOX8P57073 446 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 PDE1BQ01064 536 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 ATP1A4Q13733 1029 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 NFE2L1Q14494 772 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 NCF4Q15080 339 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 HADHQ16836 314 aaKnown RBP7.11□□□□□ -1.27
YBX3-209ENST00000540747 ZNF658BQ4V348 819 aaPredicted RBP7.11□□□□□ -1.27
YBX3-209ENST00000540747 ZRANB3Q5FWF4 1079 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 GPRC6AQ5T6X5 926 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 DUS1LQ6P1R4 473 aaKnown RBP7.11□□□□□ -1.27
YBX3-209ENST00000540747 FBXO38Q6PIJ6 1188 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 KDELC1Q6UW63 502 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 SPOCD1Q6ZMY3 1216 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 MRGPREQ86SM8 312 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 NT5DC3Q86UY8 548 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 VSIG1Q86XK7 387 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 TMEM126BQ8IUX1 230 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 SYTL1Q8IYJ3 562 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 KCTD6Q8NC69 237 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 CCNYQ8ND76 341 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 OR1L3Q8NH93 324 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 SPATA22Q8NHS9 363 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 PRR7Q8TB68 274 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 BRSK1Q8TDC3 778 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 CPT1BQ92523 772 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 RMDN2Q96LZ7 410 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 SRPK1Q96SB4 655 aaKnown RBP7.11□□□□□ -1.27
YBX3-209ENST00000540747 BPIFA3Q9BQP9 254 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 PITPNM3Q9BZ71 974 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 GPR63Q9BZJ6 419 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 GLOD4Q9HC38 313 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 SLAMF7Q9NQ25 335 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 HRASLS2Q9NWW9 162 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 GPR83Q9NYM4 423 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 SNX7Q9UNH6 387 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 PSMD13Q9UNM6 376 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 SLC5A6Q9Y289 635 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 NTNG1Q9Y2I2 539 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 PCDHGA10Q9Y5H3 936 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 ITPR3Q14573 2671 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 PCM1Q15154 2024 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 CROCCQ5TZA2 2017 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 A0A1W2PQJ5 194 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 UBA6A0AVT1 1052 aaPredicted RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 OR6C74A6NCV1 312 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 MGAT4DA6NG13 374 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 E2F3O00716 465 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 ZNF185O15231 689 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 UGT1A9O60656 530 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 EPOP01588 193 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 SLC4A1P02730 911 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 KLK3P07288 261 aaPredicted RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 PRF1P14222 555 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 UGT1A6P19224 532 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 UGT1A1P22309 533 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 UGT1A4P22310 534 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 CD68P34810 354 aaPredicted RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 GJC1P36383 396 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 GABRA4P48169 554 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 RRADP55042 308 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 TYRO3Q06418 890 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 MYBPC3Q14896 1274 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 NR1I3Q14994 352 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 PLCL1Q15111 1095 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 PRKD1Q15139 912 aaPredicted RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 NOMO1Q15155 1222 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 PCSK7Q16549 785 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 BCL7AQ4VC05 210 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 LDLRAP1Q5SW96 308 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 ZDHHC20Q5W0Z9 365 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 ALKBH5Q6P6C2 394 aaKnown RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 Q6ZS92 163 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 OOSP2Q86WS3 158 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 MAP7D3Q8IWC1 876 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 IQCKQ8N0W5 287 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 SPDYE1Q8NFV5 336 aaPredicted RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 LINC00615Q96LM1 132 aaPredicted RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 TEKT5Q96M29 485 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 AGAP3Q96P47 875 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 TLR10Q9BXR5 811 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 ZCCHC2Q9C0B9 1178 aaKnown RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 WWP1Q9H0M0 922 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 TRABDQ9H4I3 376 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 ZNF552Q9H707 407 aaPredicted RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 UGT1A7Q9HAW7 530 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 UGT1A10Q9HAW8 530 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 UGT1A8Q9HAW9 530 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 CBX8Q9HC52 389 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 SYTL2Q9HCH5 934 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 BPIFA1Q9NP55 256 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 C1GALT1Q9NS00 363 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 IGSF5Q9NSI5 407 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 IMP3Q9NV31 184 aaKnown RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 B3GNT3Q9Y2A9 372 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 CFAP20Q9Y6A4 193 aaKnown RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 BZW2Q9Y6E2 419 aaKnown RBP7.1□□□□□ -1.27
YBX3-209ENST00000540747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.1□□□□□ -1.27
YBX3-209ENST00000540747 PIKFYVEQ9Y2I7 2098 aa7.1□□□□□ -1.27
YBX3-209ENST00000540747 KLHL33A6NCF5 533 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 ANKUB1A6NFN9 424 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms