RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 HNRNPKP61978 463 aaKnown RBP eCLIP16.4■□□□□ 0.22
UBC-208ENST00000540700 TIAL1Q01085 375 aaKnown RBP eCLIP16.4■□□□□ 0.22
UBC-208ENST00000540700 CFHR1Q03591 330 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 GTF2H3Q13889 308 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 UAP1Q16222 522 aaPredicted RBP16.4■□□□□ 0.22
UBC-208ENST00000540700 KBTBD12Q3ZCT8 623 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 NAPRTQ6XQN6 538 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 CYS1Q717R9 158 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 CHST15Q7LFX5 561 aaPredicted RBP16.4■□□□□ 0.22
UBC-208ENST00000540700 LRRTM4Q86VH4 590 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 KRT222Q8N1A0 295 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 LSM14AQ8ND56 463 aaKnown RBP16.4■□□□□ 0.22
UBC-208ENST00000540700 ACVR1CQ8NER5 493 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 UHMK1Q8TAS1 419 aaKnown RBP16.4■□□□□ 0.22
UBC-208ENST00000540700 GPBAR1Q8TDU6 330 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 SLC13A1Q9BZW2 595 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 ZCCHC2Q9C0B9 1178 aaKnown RBP16.4■□□□□ 0.22
UBC-208ENST00000540700 TRNAU1APQ9NX07 287 aaKnown RBP16.4■□□□□ 0.22
UBC-208ENST00000540700 GALPQ9UBC7 116 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 PCDHGA1Q9Y5H4 931 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 UBA6A0AVT1 1052 aaPredicted RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 CFAP99D6REC4 459 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 J3QKU1 62 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 PRMT5O14744 637 aaPredicted RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 AQP9O43315 295 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 RIPK2O43353 540 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 POP7O75817 140 aaKnown RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 FAM155BO75949 473 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 ZNF7P17097 686 aaPredicted RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 RPS3P23396 243 aaKnown RBP eCLIP16.39■□□□□ 0.211e-9■■■□□ 17
UBC-208ENST00000540700 BLKP51451 505 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 PGGT1BP53609 377 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 PMS2P54278 862 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 EIF3BP55884 814 aaKnown RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 CXADRP78310 365 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 SLMAPQ14BN4 828 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 RBM20Q5T481 1227 aaKnown RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 SDCCAG8Q86SQ7 713 aaPredicted RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 LMNTD2Q8IXW0 634 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 EID2Q8N6I1 236 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 CALML6Q8TD86 181 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 HEXDCQ8WVB3 486 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 LINC00615Q96LM1 132 aaPredicted RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 TTC25Q96NG3 672 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 TCF12Q99081 682 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 TSPYL1Q9H0U9 437 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 SPATS2LQ9NUQ6 558 aaKnown RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 INTS10Q9NVR2 710 aaKnown RBP16.39■□□□□ 0.21
UBC-208ENST00000540700 GPR34Q9UPC5 381 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 DNAJC16Q9Y2G8 782 aa16.39■□□□□ 0.21
UBC-208ENST00000540700 TEX51A0A1B0GUA7 166 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 H3BM21 787 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 KMOO15229 486 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 YY2O15391 372 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 DFNA5O60443 496 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 NIPSNAP2O75323 286 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 AP2A2O94973 939 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 RALBP11234 206 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 CTSEP14091 401 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 ARRB1P49407 418 aaPredicted RBP16.38■□□□□ 0.21
UBC-208ENST00000540700 ADARP55265 1226 aaKnown RBP16.38■□□□□ 0.21
UBC-208ENST00000540700 NFE2L1Q14494 772 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 DEFB133Q30KQ1 61 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 TAF1BQ53T94 588 aaPredicted RBP16.38■□□□□ 0.21
UBC-208ENST00000540700 ZNF449Q6P9G9 518 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 SLC30A9Q6PML9 568 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 PCSK4Q6UW60 755 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 CEP128Q6ZU80 1094 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 SCG3Q8WXD2 468 aaKnown RBP16.38■□□□□ 0.21
UBC-208ENST00000540700 FGF11Q92914 225 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 NDNQ99608 321 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 SLC30A3Q99726 388 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 TIMM29Q9BSF4 260 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 NRSN2Q9GZP1 204 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 KLC4Q9NSK0 619 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 ZFATQ9P243 1243 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 SPASTQ9UBP0 616 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 FAM8A1Q9UBU6 413 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 TBC1D29Q9UFV1 150 aa16.38■□□□□ 0.21
UBC-208ENST00000540700 A6NCN8 305 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 PYCARD-AS1I3L0S3 204 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 TRIM38O00635 465 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 FFAR2O15552 330 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 BRINP1O60477 761 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 SPAG6O75602 509 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 MYF5P13349 255 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 CCR7P32248 378 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 STX2P32856 288 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 ACTR1BP42025 376 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 ACADVLP49748 655 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 ACTR1AP61163 376 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 RTP5Q14D33 572 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 INSCQ1MX18 579 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 RNF187Q5TA31 235 aaPredicted RBP16.37■□□□□ 0.21
UBC-208ENST00000540700 KIAA0408Q6ZU52 694 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 TRMT10CQ7L0Y3 403 aaKnown RBP16.37■□□□□ 0.21
UBC-208ENST00000540700 STRA8Q7Z7C7 330 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 GALNT7Q86SF2 657 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 OR2L2Q8NH16 312 aa16.37■□□□□ 0.21
UBC-208ENST00000540700 GIMAP7Q8NHV1 300 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms