RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 CNTN1Q12860 1018 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 GBX1Q14549 363 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 TGFBIQ15582 683 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 TBCCQ15814 346 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 PPP1R3AQ16821 1122 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 ACSBG2Q5FVE4 666 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 SH2D4BQ5SQS7 431 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 PIP5KL1Q5T9C9 394 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 METTL21CQ5VZV1 264 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 SBSNQ6UWP8 590 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 CYHR1Q6ZMK1 362 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 CUZD1Q86UP6 607 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 RALGPS2Q86X27 583 aaPredicted RBP9.5□□□□□ -0.89
MDH1-215ENST00000539945 AFAP1L2Q8N4X5 818 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 AGR3Q8TD06 166 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 MAPK15Q8TD08 544 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 NAT14Q8WUY8 206 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 PSMG3-AS1Q96PY0 264 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 NUDT4Q9NZJ9 180 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 FADS3Q9Y5Q0 445 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 PIKFYVEQ9Y2I7 2098 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 CKAP5Q14008 2032 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 C5orf42Q9H799 3197 aa9.5□□□□□ -0.89
MDH1-215ENST00000539945 TRPC5OSA6NMA1 111 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 CAPN14A8MX76 684 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 C2CD4DB7Z1M9 353 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 H3BQ06 376 aaPredicted RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 MYO1CO00159 1063 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 PLK4O00444 970 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 NEMP1O14524 444 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 UBFD1O14562 309 aaKnown RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 TSPAN6O43657 245 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 AP1G1O43747 822 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 SGTAO43765 313 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 SYNCRIPO60506 623 aaKnown RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 SNX2O60749 519 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 MMP20O60882 483 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 SIX3O95343 332 aaPredicted RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 FGF4P08620 206 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 RPS17P08708 135 aaKnown RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 C6P13671 934 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 C5AR1P21730 350 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 EEF1DP29692 281 aaKnown RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 DRD3P35462 400 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 WASP42768 502 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 RGS19P49795 217 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 SATB1Q01826 763 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 CST6Q15828 149 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 KHDC1Q4VXA5 237 aaKnown RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 SLC9B1Q4ZJI4 515 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 TMEM196Q5HYL7 178 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 PLEKHS1Q5SXH7 462 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 VWA5B1Q5TIE3 1220 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 ANKS6Q68DC2 871 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 RIPOR1Q6ZS17 1223 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 FRA10AC1Q70Z53 315 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 ASRGL1Q7L266 308 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 SLC44A3Q8N4M1 653 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 AADATQ8N5Z0 425 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 ZNF483Q8TF39 744 aaPredicted RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 DNASE1L2Q92874 299 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 NUS1Q96E22 293 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 PRR11Q96HE9 360 aaPredicted RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 NSL1Q96IY1 281 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 GABRG3Q99928 467 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 FAM126AQ9BYI3 521 aaPredicted RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 SHCBP1LQ9BZQ2 653 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 EPHX3Q9H6B9 360 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 C8orf33Q9H7E9 229 aaPredicted RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 FBRSQ9HAH7 460 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 TCF7L2Q9NQB0 619 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 CD274Q9NZQ7 290 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 MBD1Q9UIS9 605 aaPredicted RBP9.49□□□□□ -0.89
MDH1-215ENST00000539945 TRAF6Q9Y4K3 522 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 OARD1Q9Y530 152 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 COL4A2P08572 1712 aa9.49□□□□□ -0.89
MDH1-215ENST00000539945 CFAP73A6NFT4 308 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 LRRC14BA6NHZ5 514 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 TMEM233B4DJY2 109 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 RAD51BO15315 384 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 MID1O15344 667 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 NUAK1O60285 661 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 LZTS3O60299 673 aaPredicted RBP9.48□□□□□ -0.89
MDH1-215ENST00000539945 CDK14O94921 469 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 SOD1P00441 154 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 FTH1P02794 183 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 DRD1P21728 446 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 TARSP26639 723 aaKnown RBP9.48□□□□□ -0.89
MDH1-215ENST00000539945 NTSR1P30989 418 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 RASSF2P50749 326 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
MDH1-215ENST00000539945 SEC13P55735 322 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 LCP2Q13094 533 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 SMAD4Q13485 552 aaKnown RBP9.48□□□□□ -0.89
MDH1-215ENST00000539945 PCBP2Q15366 365 aaKnown RBP eCLIP9.48□□□□□ -0.89
MDH1-215ENST00000539945 C2orf27AQ580R0 203 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 CDKL4Q5MAI5 379 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 AGBL4Q5VU57 503 aa9.48□□□□□ -0.89
MDH1-215ENST00000539945 ZNF776Q68DI1 518 aaPredicted RBP9.48□□□□□ -0.89
MDH1-215ENST00000539945 SDE2Q6IQ49 451 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms