RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 FAM126AQ9BYI3 521 aaPredicted RBP16.61■□□□□ 0.25
COPS3-212ENST00000539941 ZCCHC2Q9C0B9 1178 aaKnown RBP16.61■□□□□ 0.25
COPS3-212ENST00000539941 FAM192AQ9GZU8 254 aa16.61■□□□□ 0.25
COPS3-212ENST00000539941 MYLK2Q9H1R3 596 aa16.61■□□□□ 0.25
COPS3-212ENST00000539941 GSTO2Q9H4Y5 243 aa16.61■□□□□ 0.25
COPS3-212ENST00000539941 EPHX3Q9H6B9 360 aa16.61■□□□□ 0.25
COPS3-212ENST00000539941 HEBP1Q9NRV9 189 aa16.61■□□□□ 0.25
COPS3-212ENST00000539941 ZFP69BQ9UJL9 534 aa16.61■□□□□ 0.25
COPS3-212ENST00000539941 HDAC3O15379 428 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 CCDC22O60826 627 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 SUPT7LO94864 414 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 C7P10643 843 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 COPAP53621 1224 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 FBXO43Q4G163 708 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 UNC50Q53HI1 259 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 C2orf27AQ580R0 203 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 FRA10AC1Q70Z53 315 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 MTDHQ86UE4 582 aaKnown RBP16.6■□□□□ 0.25
COPS3-212ENST00000539941 LZICQ8WZA0 190 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 SCML1Q9UN30 329 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 COQ6Q9Y2Z9 468 aa16.6■□□□□ 0.25
COPS3-212ENST00000539941 RAD51BO15315 384 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SGTAO43765 313 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 NUAK1O60285 661 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SNX2O60749 519 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SOD1P00441 154 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SERPINB3P29508 390 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 CCR7P32248 378 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 GPR1P46091 355 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 AGERQ15109 404 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 TGFBIQ15582 683 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SMAD2Q15796 467 aaKnown RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 SEL1L3Q68CR1 1132 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 IRGCQ6NXR0 463 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 EPGNQ6UW88 154 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SBSNQ6UWP8 590 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 NEK10Q6ZWH5 1172 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 MAVSQ7Z434 540 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 CLNKQ7Z7G1 428 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 HDDC3Q8N4P3 179 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 TXLNGQ9NUQ3 528 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 ZDHHC2Q9UIJ5 367 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SORCS3Q9UPU3 1222 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 OARD1Q9Y530 152 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 F5P12259 2224 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 ADAM23O75077 832 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 KLF8O95600 359 aaPredicted RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 S100BP04271 92 aaPredicted RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 SERPINA6P08185 405 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 RPS17P08708 135 aaKnown RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 MPC1LP0DKB6 136 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 HOXB2P14652 356 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 CCR10P46092 362 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 PRLHRP49683 370 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 IDH3AP50213 366 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 TAS2R38P59533 333 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 TMEM115Q12893 351 aaPredicted RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 PPP1R3AQ16821 1122 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 KHDC1Q4VXA5 237 aaKnown RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 ANKS6Q68DC2 871 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 RAET1GQ6H3X3 334 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 CYHR1Q6ZMK1 362 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 DET1Q7L5Y6 550 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 CUZD1Q86UP6 607 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 TRIM74Q86UV6 250 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 TRIM73Q86UV7 250 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 NAT14Q8WUY8 206 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 MOCOSQ96EN8 888 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 RILPQ96NA2 401 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 COG4Q9H9E3 785 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 RDH14Q9HBH5 336 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SAR1AQ9NR31 198 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 SLC2A4RGQ9NR83 387 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 CD274Q9NZQ7 290 aa16.59■□□□□ 0.25
COPS3-212ENST00000539941 CNOT6Q9ULM6 557 aaKnown RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 TNPO3Q9Y5L0 923 aaKnown RBP16.59■□□□□ 0.25
COPS3-212ENST00000539941 DPPA5A6NC42 116 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 MTX2O75431 263 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 TM7SF2O76062 418 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 HK3P52790 923 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 CDKL4Q5MAI5 379 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 KIAA1211LQ6NV74 962 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 ASRGL1Q7L266 308 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 PDPRQ8NCN5 879 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 ASZ1Q8WWH4 475 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 EBF4Q9BQW3 602 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 TUBB6Q9BUF5 446 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 ACSS2Q9NR19 701 aa16.58■□□□□ 0.24
COPS3-212ENST00000539941 A0A1W2PP55 124 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 A0A1W2PQF6 199 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 TRPC5OSA6NMA1 111 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 FCHO1O14526 889 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 HGSO14964 777 aaPredicted RBP16.57■□□□□ 0.24
COPS3-212ENST00000539941 ATG13O75143 517 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 DNTTP04053 509 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 C8GP07360 202 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 ENO2P09104 434 aaPredicted RBP16.57■□□□□ 0.24
COPS3-212ENST00000539941 GSTM1P09488 218 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 GNAZP19086 355 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms