RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 DLG1Q12959 904 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 BCL7AQ4VC05 210 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 PYCR3Q53H96 274 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 CTSL3PQ5NE16 218 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 TMEM220Q6QAJ8 160 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 PIM3Q86V86 326 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 HID1Q8IV36 788 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 PHACTR4Q8IZ21 702 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 CENPLQ8N0S6 344 aaPredicted RBP16.94■□□□□ 0.3
CLN6-202ENST00000538696 CLDN19Q8N6F1 224 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 LKAAEAR1Q8TD35 194 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 SGF29Q96ES7 293 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 TSPAN17Q96FV3 270 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 ZNF317Q96PQ6 595 aaPredicted RBP16.94■□□□□ 0.3
CLN6-202ENST00000538696 PHOX2BQ99453 314 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 EPN3Q9H201 632 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
CLN6-202ENST00000538696 VPS9D1Q9Y2B5 631 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 PRKAB1Q9Y478 270 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 DGKBQ9Y6T7 804 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 A0A087X1B8 175 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 PROB1E7EW31 1015 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 PFDN6O15212 129 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 GRID2O43424 1007 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 AP2A2O94973 939 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 GSTA1P08263 222 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 NME1P15531 152 aaKnown RBP16.93■□□□□ 0.3
CLN6-202ENST00000538696 TAC1P20366 129 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 PRLHRP49683 370 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 HK3P52790 923 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 PDK4Q16654 411 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 ZNF423Q2M1K9 1284 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 PLA2G4EQ3MJ16 856 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 PRAMEF14Q5SWL7 426 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 RD3Q7Z3Z2 195 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 LRRTM4Q86VH4 590 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 GALNT13Q8IUC8 556 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 TRAPPC5Q8IUR0 188 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 LRRC34Q8IZ02 419 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 BEND7Q8N7W2 519 aaPredicted RBP16.93■□□□□ 0.3
CLN6-202ENST00000538696 BIRC8Q96P09 236 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 OR2M4Q96R27 311 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 NUSAP1Q9BXS6 441 aaKnown RBP16.93■□□□□ 0.3
CLN6-202ENST00000538696 CLPBQ9H078 707 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 ERVMER34-1Q9H9K5 563 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 DNAJC28Q9NX36 388 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.93■□□□□ 0.3
CLN6-202ENST00000538696 NCDNQ9UBB6 729 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 GNPTGQ9UJJ9 305 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 ACOT9Q9Y305 439 aa16.93■□□□□ 0.3
CLN6-202ENST00000538696 GMNCA6NCL1 334 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 TCP11X1B4DZS4 312 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 KHNYNO15037 678 aaKnown RBP16.92■□□□□ 0.3
CLN6-202ENST00000538696 TNFP01375 233 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 CSF2P04141 144 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 PKMP14618 531 aaKnown RBP16.92■□□□□ 0.3
CLN6-202ENST00000538696 JUNDP17535 347 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 DRD4P21917 467 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 ADARP55265 1226 aaKnown RBP16.92■□□□□ 0.3
CLN6-202ENST00000538696 NHLH1Q02575 133 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 SHBQ15464 509 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 TMEM207Q6UWW9 146 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 C11orf96Q7Z7L8 435 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 OXR1Q8N573 874 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 NXNL1Q96CM4 212 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 CHMP6Q96FZ7 201 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 ELF4Q99607 663 aaPredicted RBP16.92■□□□□ 0.3
CLN6-202ENST00000538696 MECRQ9BV79 373 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 TM7SF3Q9NS93 570 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 IGSF5Q9NSI5 407 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 APOBEC3BQ9UH17 382 aaKnown RBP16.92■□□□□ 0.3
CLN6-202ENST00000538696 ZNHIT2Q9UHR6 403 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 MED16Q9Y2X0 877 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 PLEKHM1Q9Y4G2 1056 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 GPSM3Q9Y4H4 160 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 PCDHB1Q9Y5F3 818 aa16.92■□□□□ 0.3
CLN6-202ENST00000538696 IQCF5A8MTL0 148 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 ARHGAP33O14559 1287 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 KMOO15229 486 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 NIPSNAP2O75323 286 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 ESR1P03372 595 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 ZNF806P0C7X5 589 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 COL6A2P12110 1019 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 ACP5P13686 325 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 ENGP17813 658 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 BGNP21810 368 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 PBLDP30039 288 aaPredicted RBP16.91■□□□□ 0.3
CLN6-202ENST00000538696 SPEM2Q0P670 501 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 HLA-BQ31612 363 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 SPATA6LQ8N4H0 392 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 CCDC63Q8NA47 563 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 OR2I1PQ8NGU4 316 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 FAM136AQ96C01 138 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 ZNF514Q96K75 400 aaPredicted RBP16.91■□□□□ 0.3
CLN6-202ENST00000538696 TSNARE1Q96NA8 513 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 GPR78Q96P69 363 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 LRRC61Q9BV99 259 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 UNKQ9C0B0 810 aaKnown RBP16.91■□□□□ 0.3
CLN6-202ENST00000538696 ZDHHC5Q9C0B5 715 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 FAM107BQ9H098 131 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms