RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PDPRQ8NCN5 879 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 DGCR14Q96DF8 476 aaKnown RBP24.5■■□□□ 1.51
RAB40C-204ENST00000538492 CAAP1Q9H8G2 361 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 LSM7Q9UK45 103 aaKnown RBP24.5■■□□□ 1.51
RAB40C-204ENST00000538492 PTBP2Q9UKA9 531 aaKnown RBP24.5■■□□□ 1.51
RAB40C-204ENST00000538492 COMMD3-BMI1R4GMX3 469 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 VILLO15195 856 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 TEX28O15482 410 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 MT-ND1P03886 318 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 GJA1P17302 382 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 CREB5Q02930 508 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 MYLK3Q32MK0 819 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 PPM1MQ96MI6 270 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 HERC2P3Q9BVR0 1158 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.49■■□□□ 1.51
RAB40C-204ENST00000538492 FKTNO75072 461 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 ZNF821O75541 412 aaPredicted RBP24.49■■□□□ 1.51
RAB40C-204ENST00000538492 RSL1D1O76021 490 aaKnown RBP24.49■■□□□ 1.51
RAB40C-204ENST00000538492 DGKAP23743 735 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 STK19P49842 368 aaPredicted RBP24.49■■□□□ 1.51
RAB40C-204ENST00000538492 TRIM60Q495X7 471 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 ZBTB2Q8N680 514 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 ACDQ96AP0 544 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 ATP13A3Q9H7F0 1226 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 HEBP1Q9NRV9 189 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 OAZ3Q9UMX2 235 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 ANGPTL3Q9Y5C1 460 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 CTSOP43234 321 aaPredicted RBP24.49■■□□□ 1.51
RAB40C-204ENST00000538492 EMX2Q04743 252 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 MBOAT1Q6ZNC8 495 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 PTRH1Q86Y79 214 aaKnown RBP24.49■■□□□ 1.51
RAB40C-204ENST00000538492 HS6ST3Q8IZP7 471 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 ADGRG2Q8IZP9 1017 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 TRPV3Q8NET8 790 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 VWCEQ96DN2 955 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 WWOXQ9NZC7 414 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 SH3BP1Q9Y3L3 701 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 OARD1Q9Y530 152 aa24.49■■□□□ 1.51
RAB40C-204ENST00000538492 PDE4DIPQ5VU43 2346 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 RNF103-CHMP3A0A140T963 221 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 TCRBV5S2A0A599 114 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 NPIPB15A6NHN6 443 aaPredicted RBP24.48■■□□□ 1.51
RAB40C-204ENST00000538492 NRG2O14511 850 aaPredicted RBP24.48■■□□□ 1.51
RAB40C-204ENST00000538492 DEFB103AP81534 67 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.48■■□□□ 1.51
RAB40C-204ENST00000538492 FAM217AQ8IXS0 508 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 TSPAN14Q8NG11 270 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 LATS2Q9NRM7 1088 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 FARSBQ9NSD9 589 aaKnown RBP24.48■■□□□ 1.51
RAB40C-204ENST00000538492 INTS6Q9UL03 887 aaKnown RBP24.48■■□□□ 1.51
RAB40C-204ENST00000538492 GLUD1P00367 558 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 GPIP06744 558 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 GNAO1P09471 354 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 OR4D2P58180 307 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 MTPNP58546 118 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 SPATS1Q496A3 300 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 ITIH5Q86UX2 942 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 FIBCD1Q8N539 461 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 FAM47BQ8NA70 645 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 SEPHS2Q99611 448 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 ANKRD60Q9BZ19 345 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 SMG9Q9H0W8 520 aaKnown RBP24.48■■□□□ 1.51
RAB40C-204ENST00000538492 RPF2Q9H7B2 306 aaKnown RBP24.48■■□□□ 1.51
RAB40C-204ENST00000538492 OLAHQ9NV23 265 aa24.48■■□□□ 1.51
RAB40C-204ENST00000538492 IGSF6O95976 241 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 SLC2A4P14672 509 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 RPL10P27635 214 aaKnown RBP24.47■■□□□ 1.51
RAB40C-204ENST00000538492 CCT8P50990 548 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 EEFSECP57772 596 aaKnown RBP24.47■■□□□ 1.51
RAB40C-204ENST00000538492 RPL38P63173 70 aaKnown RBP24.47■■□□□ 1.51
RAB40C-204ENST00000538492 SELPLGQ14242 412 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 PLEKHG6Q3KR16 790 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 GPRC6AQ5T6X5 926 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 CNKSR3Q6P9H4 555 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 HID1Q8IV36 788 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 GPR26Q8NDV2 337 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 ZFP28Q8NHY6 868 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 TFAP2CQ92754 450 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 CENPNQ96H22 339 aaPredicted RBP24.47■■□□□ 1.51
RAB40C-204ENST00000538492 SLC4A7Q9Y6M7 1214 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 TRBV5-4A0A0C4DH59 114 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 DLGAP1O14490 977 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 H6PDO95479 791 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 SPAM1P38567 509 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 PTGR1Q14914 329 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 SGO1Q5FBB7 561 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 INTS11Q5TA45 600 aaKnown RBP24.47■■□□□ 1.51
RAB40C-204ENST00000538492 DLEU7Q6UYE1 221 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 SLC39A5Q6ZMH5 540 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 FAM43BQ6ZT52 329 aaPredicted RBP24.47■■□□□ 1.51
RAB40C-204ENST00000538492 ANKRD33Q7Z3H0 272 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 GOLM1Q8NBJ4 401 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 SMOXQ9NWM0 555 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 SPG21Q9NZD8 308 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 OPTCQ9UBM4 332 aa24.47■■□□□ 1.51
RAB40C-204ENST00000538492 MYOFQ9NZM1 2061 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 ENO2P09104 434 aaPredicted RBP24.46■■□□□ 1.51
RAB40C-204ENST00000538492 CHRM1P11229 460 aaPredicted RBP24.46■■□□□ 1.51
RAB40C-204ENST00000538492 HRH2P25021 359 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 MRPS31Q92665 395 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms