RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 CA5AP35218 305 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 RORAP35398 523 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 RRADP55042 308 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 TYRO3Q06418 890 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 FNBP1LQ5T0N5 605 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 NPNTQ6UXI9 565 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 GLIS1Q8NBF1 620 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 TADA1Q96BN2 335 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 SGSM3Q96HU1 749 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 NAP1L5Q96NT1 182 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 INSM2Q96T92 566 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 ACTR5Q9H9F9 607 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 PCMTD2Q9NV79 361 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 BTRCQ9Y297 605 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 CROCCQ5TZA2 2017 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 ANKUB1A6NFN9 424 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 BUD23O43709 281 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 CAPN1P07384 714 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 POLR2CP19387 275 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 CDH3P22223 829 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 KDELR1P24390 212 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 AKT1P31749 480 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 HNRNPH3P31942 346 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 HMGCLP35914 325 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 SPAM1P38567 509 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 ELOAQ14241 798 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 NCF4Q15080 339 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 ANO6Q4KMQ2 910 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 ZRANB3Q5FWF4 1079 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 LDLRAP1Q5SW96 308 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 GPRC6AQ5T6X5 926 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 VWA5B1Q5TIE3 1220 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 C1QL3Q5VWW1 255 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 METRNLQ641Q3 311 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 ALKBH5Q6P6C2 394 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 TICAM1Q8IUC6 712 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 DDHD1Q8NEL9 900 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 OR1L3Q8NH93 324 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 RANBP9Q96S59 729 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 XPO4Q9C0E2 1151 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 SLC7A5P2Q9GIP4 190 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 NAT10Q9H0A0 1025 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 ILKAPQ9H0C8 392 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 KIR3DX1Q9H7L2 352 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 B3GNT3Q9Y2A9 372 aa13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 BZW2Q9Y6E2 419 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-206ENST00000538456 A0A0A6YYK5 440 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 GLYATL1P3A0A0U1RQE8 302 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 A0A1B0GTH6 734 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 GSAPA4D1B5 854 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 APOL1O14791 398 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 PPP1R12AO14974 1030 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 SERPING1P05155 500 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 SLC35G4P0C7Q5 338 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 CHRNA4P43681 627 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 PREPP48147 710 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 DYNLT1P63172 113 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 PRKAA1Q13131 559 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 KRT33BQ14525 404 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 GSE1Q14687 1217 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 PDK1Q15118 436 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 ZNF789Q5FWF6 425 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 RAB43Q86YS6 212 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 CARFQ8N187 725 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 SLC25A41Q8N5S1 370 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 OR4E2Q8NGC2 313 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 KLHL25Q9H0H3 589 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 GLOD4Q9HC38 313 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 POMT2Q9UKY4 750 aa13.62□□□□□ -0.23
SMARCA4-206ENST00000538456 POLEQ07864 2286 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 C9J4A7 227 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 LDB2O43679 373 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 ALPPP05187 535 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 POLBP06746 335 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 MSH3P20585 1137 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 LMAN1P49257 510 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 SLC14A2Q15849 920 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 LONRF2Q1L5Z9 754 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 SIRPB2Q5JXA9 342 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 LYPLAL1Q5VWZ2 237 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 ZDHHC20Q5W0Z9 365 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 SLC9A4Q6AI14 798 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 GLT6D1Q7Z4J2 308 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 MRGPREQ86SM8 312 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 TTC13Q8NBP0 860 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 BLOC1S5Q8TDH9 187 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 CPLX3Q8WVH0 158 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 RMDN2Q96LZ7 410 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 OLFM3Q96PB7 478 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 TRABDQ9H4I3 376 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 IL17CQ9P0M4 197 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 C5AR2Q9P296 337 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 PADI2Q9Y2J8 665 aa13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 DNMT3AQ9Y6K1 912 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-206ENST00000538456 SVILO95425 2214 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms