RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 UBE2IP63279 158 aaKnown RBP12.92□□□□□ -0.34
COPS7A-207ENST00000538375 CYP4F3Q08477 520 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 CALCOCO2Q13137 446 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 BOP1Q14137 746 aaKnown RBP12.92□□□□□ -0.34
COPS7A-207ENST00000538375 WHAMMP3Q1A5X7 153 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 MSS51Q4VC12 460 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 SYTL3Q4VX76 610 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 SNAP47Q5SQN1 464 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 ARMC3Q5W041 872 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 PACS1Q6VY07 963 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 TMEM26Q6ZUK4 368 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 B3GNT8Q7Z7M8 397 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 TMEM135Q86UB9 458 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 AGGF1Q8N302 714 aaeCLIP12.92□□□□□ -0.34
COPS7A-207ENST00000538375 KIF18AQ8NI77 898 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 CFAP36Q96G28 342 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 FERD3LQ96RJ6 166 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 EBNA1BP2Q99848 306 aaKnown RBP12.92□□□□□ -0.34
COPS7A-207ENST00000538375 ERP44Q9BS26 406 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 SLC40A1Q9NP59 571 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 CRYL1Q9Y2S2 319 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 UTP11Q9Y3A2 253 aaKnown RBP12.92□□□□□ -0.34
COPS7A-207ENST00000538375 ENTPD2Q9Y5L3 495 aa12.92□□□□□ -0.34
COPS7A-207ENST00000538375 ATRXP46100 2492 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 AKAP13Q12802 2813 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 PTPRBP23467 1997 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 TMEM8BA6NDV4 472 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 A8MU76 341 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 PRMT5O14744 637 aaPredicted RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 DUX1O43812 170 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 USP1O94782 785 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 SEC31AO94979 1220 aaKnown RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 MPOP05164 745 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 GSTM1P09488 218 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 MTHFD1P11586 935 aaKnown RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 HOXB3P14651 431 aaPredicted RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 ARNTP27540 789 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 PDHA2P29803 388 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 MAGEA3P43357 314 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 ARCN1P48444 511 aaKnown RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 GPLD1P80108 840 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 GSTM4Q03013 218 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 HSPA14Q0VDF9 509 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 CTBP1Q13363 440 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 GPR18Q14330 331 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 NR1D2Q14995 579 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 PLCL1Q15111 1095 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 HIF1AQ16665 826 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 LONRF1Q17RB8 773 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 C3orf38Q5JPI3 329 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 ZNF470Q6ECI4 717 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 DUS1LQ6P1R4 473 aaKnown RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 ANKMY2Q8IV38 441 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 KRT222Q8N1A0 295 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 PHC3Q8NDX5 983 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 MDM1Q8TC05 714 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 JPH3Q8WXH2 748 aaPredicted RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 TMEM159Q96B96 161 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 GRAMD1AQ96CP6 724 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 TCF12Q99081 682 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 NUDT22Q9BRQ3 303 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 SEMA6CQ9H3T2 930 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 CCDC86Q9H6F5 360 aaKnown RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 PPANQ9NQ55 473 aaKnown RBP12.91□□□□□ -0.34
COPS7A-207ENST00000538375 POT1Q9NUX5 634 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 KLHL3Q9UH77 587 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 SATB2Q9UPW6 733 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 FAM169AQ9Y6X4 670 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 COLEC10Q9Y6Z7 277 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 PKD1L2Q7Z442 2459 aa12.91□□□□□ -0.34
COPS7A-207ENST00000538375 ZCWPW2A0A1B0GU75 182 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 LIN7AO14910 233 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-207ENST00000538375 UBXN7O94888 489 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 CHRM3P20309 590 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 OGNP20774 298 aaKnown RBP12.9□□□□□ -0.34
COPS7A-207ENST00000538375 ELK3P41970 407 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 EPHA4P54764 986 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 GABREP78334 506 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 SLC7A5Q01650 507 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 PDIA2Q13087 525 aaKnown RBP12.9□□□□□ -0.34
COPS7A-207ENST00000538375 RPA4Q13156 261 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 SPANXN3Q5MJ09 141 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 RNF187Q5TA31 235 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-207ENST00000538375 CAPRIN2Q6IMN6 1127 aaKnown RBP12.9□□□□□ -0.34
COPS7A-207ENST00000538375 TMEM71Q6P5X7 295 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 ZNF574Q6ZN55 896 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-207ENST00000538375 TMPRSS9Q7Z410 1059 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 IGDCC3Q8IVU1 814 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 RBM12BQ8IXT5 1001 aaKnown RBP12.9□□□□□ -0.34
COPS7A-207ENST00000538375 UNC5BQ8IZJ1 945 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 MNS1Q8NEH6 495 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 GPR150Q8NGU9 434 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 WDR36Q8NI36 951 aaKnown RBP12.9□□□□□ -0.34
COPS7A-207ENST00000538375 GSDMBQ8TAX9 411 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 CALML6Q8TD86 181 aa12.9□□□□□ -0.34
COPS7A-207ENST00000538375 NXPE2Q96DL1 559 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms