RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 USP39Q53GS9 565 aaKnown RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 TEX44Q53QW1 395 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF805Q5CZA5 627 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 ANKRD20A2Q5SQ80 823 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 ARMC12Q5T9G4 340 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 ANKRD20A1Q5TYW2 823 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 ANKRD20A3Q5VUR7 823 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 C8orf74Q6P047 294 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 DRICH1Q6PGQ1 229 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 BRAT1Q6PJG6 821 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 CCDC137Q6PK04 289 aaKnown RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 TSSK4Q6SA08 328 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 GDPD4Q6W3E5 623 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 USP45Q70EL2 814 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 PID1Q7Z2X4 250 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 KBTBD6Q86V97 674 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 LONP2Q86WA8 852 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 LYSMD2Q8IV50 215 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 GSPT2Q8IYD1 628 aaKnown RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 NDUFAF2Q8N183 169 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF567Q8N184 647 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 PGBD5Q8N414 524 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 HDDC3Q8N4P3 179 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 TEX26Q8N6G2 289 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 CNTD1Q8N815 330 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 CDYL2Q8N8U2 506 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 TMIEQ8NEW7 156 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 CCDC110Q8TBZ0 833 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 CCHCR1Q8TD31 782 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 MAML1Q92585 1016 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 GCDHQ92947 438 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 CAVIN3Q969G5 261 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 RELTQ969Z4 430 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF641Q96N77 438 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 RUNDC3BQ96NL0 473 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 NUDCD1Q96RS6 583 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 IL12RB2Q99665 862 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 LRFN3Q9BTN0 628 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 CPEB1Q9BZB8 566 aaKnown RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 TPSD1Q9BZJ3 242 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 GBA3Q9H227 469 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 PABPC3Q9H361 631 aaKnown RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 C12orf65Q9H3J6 166 aaKnown RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 NOD2Q9HC29 1040 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 POLR3BQ9NW08 1133 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 C2orf42Q9NWW7 574 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 GEMIN8Q9NWZ8 242 aaKnown RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 FBXL12Q9NXK8 326 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 SMARCAL1Q9NZC9 954 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 EVLQ9UI08 416 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-208ENST00000538266 FBXO4Q9UKT5 387 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 FZD4Q9ULV1 537 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 EDARQ9UNE0 448 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 COL6A3P12111 3177 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 C5orf42Q9H799 3197 aa4.31□□□□□ -1.72
SNHG1-208ENST00000538266 MYO18AQ92614 2054 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 A0A1W2PQ67 120 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PRR23AA6NEV1 266 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 C5orf60A6NFR6 353 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 FAM47DPA6NHR8 397 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 LRRC72A6NJI9 287 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SRRM3A6NNA2 597 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 C16orf96A6NNT2 1141 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ERI2A8K979 691 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 F5H423 210 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 K7ESF4 209 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 AGPSO00116 658 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 MUSKO15146 869 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SLC7A4O43246 635 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PMPCBO75439 489 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF821O75541 412 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 GCATO75600 419 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 GJB3O75712 270 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RPP40O75818 363 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 FSBPO95073 299 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PIGNO95427 931 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CNOT4O95628 575 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CTSLP07711 333 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 APRTP07741 180 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 MYBL2P10244 700 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ADRB3P13945 408 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ENPP1P22413 925 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 PSMB4P28070 264 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CD6P30203 668 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 GKP32189 559 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 FDFT1P37268 417 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CD86P42081 329 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 GPR3P46089 330 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RGRP47804 291 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 FNTAP49354 379 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 VPS41P49754 854 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 SUOXP51687 545 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 COPAP53621 1224 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 GEMP55040 296 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 LGALS4P56470 323 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 RPL26P61254 145 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 BASP1P80723 227 aaKnown RBP4.3□□□□□ -1.72
SNHG1-208ENST00000538266 DR1Q01658 176 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 CD69Q07108 199 aa4.3□□□□□ -1.72
SNHG1-208ENST00000538266 ELP6Q0PNE2 266 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms