RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 RPE65Q16518 533 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 AGAP9Q5VTM2 703 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 CAPRIN2Q6IMN6 1127 aaKnown RBP12.81□□□□□ -0.36
CHFR-216ENST00000538235 CERS6Q6ZMG9 384 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 DGLUCYQ7Z3D6 616 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 SPRED1Q7Z699 444 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 RAB44Q7Z6P3 723 aaPredicted RBP12.81□□□□□ -0.36
CHFR-216ENST00000538235 PIM3Q86V86 326 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 CHCHD4Q8N4Q1 142 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 LMNTD1Q8N9Z9 388 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 GSDMBQ8TAX9 411 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 CCM2Q9BSQ5 444 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 TBC1D10AQ9BXI6 508 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 PHACTR1Q9C0D0 580 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 EPB41L4BQ9H329 900 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 TMEM9Q9P0T7 183 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHFR-216ENST00000538235 KLK13Q9UKR3 277 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 ATXN7L1Q9ULK2 861 aaPredicted RBP12.81□□□□□ -0.36
CHFR-216ENST00000538235 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 V9GYY5 206 aaPredicted RBP12.81□□□□□ -0.36
CHFR-216ENST00000538235 ASPMQ8IZT6 3477 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 CFAP99D6REC4 459 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 NTN3O00634 580 aaPredicted RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 EIF3HO15372 352 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHFR-216ENST00000538235 GPC4O75487 556 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 NDUFS3O75489 264 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 FAM155BO75949 473 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 AHSGP02765 367 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 PAMP19021 973 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 AOAHP28039 575 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 ACADLP28330 430 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 PMLP29590 882 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 MAGEA4P43358 317 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 LEPRP48357 1165 aaKnown RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 CDKN2DP55273 166 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 OR1D5P58170 312 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 PPP1CAP62136 330 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 CCL7P80098 99 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 FRG1Q14331 258 aaKnown RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 NAA30Q147X3 362 aaPredicted RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 GLE1Q53GS7 698 aaKnown RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 CDCP2Q5VXM1 449 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 NKAIN2Q5VXU1 208 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 WASH2PQ6VEQ5 465 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 B3GNT8Q7Z7M8 397 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 CFAP206Q8IYR0 622 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 ADAMTS14Q8WXS8 1223 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 IFT81Q8WYA0 676 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 ELMO1Q92556 727 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHFR-216ENST00000538235 ZNF514Q96K75 400 aaPredicted RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 OLFM1Q99784 485 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 TXLNGYQ9BZA5 131 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 CDC42EP4Q9H3Q1 356 aaKnown RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 WASH6PQ9NQA3 447 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 FAM114A2Q9NRY5 505 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 LRIT1Q9P2V4 623 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 CPNE7Q9UBL6 633 aa12.8□□□□□ -0.36
CHFR-216ENST00000538235 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 DNMT3AQ9Y6K1 912 aaPredicted RBP12.8□□□□□ -0.36
CHFR-216ENST00000538235 CEP295Q9C0D2 2601 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 C17orf113A0A1B0GUU1 675 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 FAM159BA6NKW6 160 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 NUDT21O43809 227 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 OPA1O60313 960 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 TRIM16O95361 564 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 TTC4O95801 387 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 ADRB1P08588 477 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 RALBP11234 206 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 MTHFD1P11586 935 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 PKMP14618 531 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 GLB1P16278 677 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 SDHBP21912 280 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 IDSP22304 550 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 CLCN7P51798 805 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 ADARP55265 1226 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 CAV1Q03135 178 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 FOXC1Q12948 553 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 CUL1Q13616 776 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 THOC5Q13769 683 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 GPR18Q14330 331 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 GRB7Q14451 532 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 CCSMST1Q4G0I0 132 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 AARS2Q5JTZ9 985 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 HES3Q5TGS1 186 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 LYPLAL1Q5VWZ2 237 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 MRNIPQ6NTE8 343 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 ZNF574Q6ZN55 896 aaPredicted RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 Q8N9G6 341 aaPredicted RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 SIDT2Q8NBJ9 832 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 MAPK15Q8TD08 544 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 CD200R1Q8TD46 325 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 PYROXD1Q8WU10 500 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 HEXDCQ8WVB3 486 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 RSC1A1Q92681 617 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 C12orf66Q96MD2 445 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 NUDT22Q9BRQ3 303 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 FAM167BQ9BTA0 163 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 NAT9Q9BTE0 207 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms