RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	RSC1A1	Q92681	617 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	GRAMD1A	Q96CP6	724 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	CXorf40B	Q96DE9	158 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	AHCYL2	Q96HN2	611 aa	Known RBP	10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	ZNF514	Q96K75	400 aa	Predicted RBP	10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	LINC00615	Q96LM1	132 aa	Predicted RBP	10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	RMDN2	Q96LZ7	410 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	FAM117A	Q9C073	453 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	STRADB	Q9C0K7	418 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	DDX47	Q9H0S4	455 aa	Known RBP	10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	STN1	Q9H668	368 aa	Known RBP	10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	TREX1	Q9NSU2	369 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	POT1	Q9NUX5	634 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	IMP3	Q9NV31	184 aa	Known RBP	10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	KLHL3	Q9UH77	587 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	MGA	Q8IWI9	3026 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	SDK2	Q58EX2	2172 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	ZFYVE26	Q68DK2	2539 aa		10.61	□□□□□ -0.71
LDHA-215	ENST00000537296	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.6	□□□□□ -0.71
LDHA-215	ENST00000537296		A0A087WV48	116 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	LILRA5	A6NI73	299 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	GOLGA8M	H3BSY2	632 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	CES2	O00748	559 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	DUX1	O43812	170 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	ITGA2B	P08514	1039 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	RALB	P11234	206 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	FGF3	P11487	239 aa	Predicted RBP	10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	MTHFD1	P11586	935 aa	Known RBP	10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	ARNT	P27540	789 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	RBMS1	P29558	406 aa	Known RBP	10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	PDHA2	P29803	388 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	MAGEA6	P43360	314 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	PREP	P48147	710 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	LEPR	P48357	1165 aa	Known RBP	10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	MAPK10	P53779	464 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	PAPD7	Q5XG87	772 aa	Known RBP	10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	TMEM71	Q6P5X7	295 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	LRRC8B	Q6P9F7	803 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	IGF2-AS	Q6U949	168 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	AFTPH	Q6ULP2	937 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	CREG2	Q8IUH2	290 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	LSMEM2	Q8N112	164 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	OR6P1	Q8NGX9	317 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	OR4L1	Q8NH43	312 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	LKAAEAR1	Q8TD35	194 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	SH3KBP1	Q96B97	665 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	MFSD3	Q96ES6	412 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	C12orf66	Q96MD2	445 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	ZNF578	Q96N58	590 aa	Predicted RBP	10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	OCIAD1	Q9NX40	245 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	FOXJ2	Q9P0K8	574 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	PDP2	Q9P2J9	529 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	PTPRQ	Q9UMZ3	2332 aa		10.6	□□□□□ -0.71
LDHA-215	ENST00000537296	C9orf172	C9J069	976 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	CFAP99	D6REC4	459 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	GOLGA8K	D6RF30	607 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	GOLGA8T	H3BQL2	631 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	KIF1C	O43896	1103 aa	Known RBP	10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	PRAMEF10	O60809	474 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	KCNJ13	O60928	360 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	UBXN7	O94888	489 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	F7	P08709	466 aa	Predicted RBP	10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	JMJD7	P0C870	316 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	TCP1	P17987	556 aa	Known RBP	10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	ITGB6	P18564	788 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	SLC5A2	P31639	672 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	HAL	P42357	657 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	NPY2R	P49146	381 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	EPHA4	P54764	986 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	ERVPABLB-1	P60509	514 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	BRD3	Q15059	726 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	WDR74	Q6RFH5	385 aa	Predicted RBP	10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	CLEC14A	Q86T13	490 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	JAML	Q86YT9	394 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	HM13	Q8TCT9	377 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	USP7	Q93009	1102 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	RNF31	Q96EP0	1072 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	NAP1L3	Q99457	506 aa	Predicted RBP	10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	CMKLR1	Q99788	373 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	CCM2	Q9BSQ5	444 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	IL22	Q9GZX6	179 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	COG4	Q9H9E3	785 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	UCK1	Q9HA47	277 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	THSD1	Q9NS62	852 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	IL1RAPL1	Q9NZN1	696 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	RIMKLB	Q9ULI2	386 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	AHCTF1	Q8WYP5	2266 aa		10.59	□□□□□ -0.71
LDHA-215	ENST00000537296	IQCF5	A8MTL0	148 aa		10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	TMX2-CTNND1	H3BSU7	103 aa		10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	ZW10	O43264	779 aa		10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	SLC35G4	P0C7Q5	338 aa		10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	CD46	P15529	392 aa		10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	PTGIR	P43119	386 aa		10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	FNTA	P49354	379 aa		10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	PCBP4	P57723	403 aa	Known RBP	10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	PRAME	P78395	509 aa		10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	EIF3I	Q13347	325 aa	Known RBP	10.58	□□□□□ -0.72
LDHA-215	ENST00000537296	ITIH4	Q14624	930 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms