RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 PIF1Q9H611 641 aa12.68□□□□□ -0.38
TRIM25-202ENST00000537230 NSUN3Q9H649 340 aaKnown RBP12.68□□□□□ -0.38
TRIM25-202ENST00000537230 IL21Q9HBE4 155 aa12.68□□□□□ -0.38
TRIM25-202ENST00000537230 FAIMQ9NVQ4 179 aa12.68□□□□□ -0.38
TRIM25-202ENST00000537230 AIG1Q9NVV5 245 aa12.68□□□□□ -0.38
TRIM25-202ENST00000537230 DNMT3BQ9UBC3 853 aaKnown RBP12.68□□□□□ -0.38
TRIM25-202ENST00000537230 REV3LO60673 3130 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 BBIP1A8MTZ0 92 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 GFRA2O00451 464 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 GIPC1O14908 333 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 KATNA1O75449 491 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 CLDN7O95471 211 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 ESR1P03372 595 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 CNPP09543 421 aaKnown RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 UROSP10746 265 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 GJA1P17302 382 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 CD247P20963 164 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 MYF6P23409 242 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 PSMD7P51665 324 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 RCAN2Q14206 197 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 INO80DQ53TQ3 878 aaPredicted RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 C6orf136Q5SQH8 315 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 OGFOD2Q6N063 350 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 XKR5Q6UX68 686 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 CROCCP3Q8IVE0 287 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 MFSD2AQ8NA29 543 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 MYO19Q96H55 970 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 NPLQ9BXD5 320 aaPredicted RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 PAIP1Q9H074 479 aaKnown RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 AGPAT4Q9NRZ5 378 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 INTS7Q9NVH2 962 aaKnown RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 NUP214P35658 2090 aaPredicted RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 C1orf232A0A0U1RR37 186 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 TRIM64CA6NLI5 447 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 PRMT5O14744 637 aaPredicted RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 PGLSO95336 258 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 CAPN1P07384 714 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 NCK1P16333 377 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 GDF5P43026 501 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 YAP1P46937 504 aaKnown RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 CACNG1Q06432 222 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 FGD3Q5JSP0 725 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 TPGS1Q6ZTW0 290 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 MINDY1Q8N5J2 469 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 CEP295NLQ96MC4 621 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 YIPF2Q9BWQ6 316 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
TRIM25-202ENST00000537230 IL26Q9NPH9 171 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 ZNHIT2Q9UHR6 403 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 VPS9D1Q9Y2B5 631 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 PCDHA9Q9Y5H5 950 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 INSL5Q9Y5Q6 135 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 SLC30A1Q9Y6M5 507 aa12.67□□□□□ -0.38
TRIM25-202ENST00000537230 H3BMQ9 156 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 OR7A17O14581 309 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 EI24O14681 340 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 MT-ND1P03886 318 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 MAGEA10P43363 369 aaPredicted RBP12.66□□□□□ -0.38
TRIM25-202ENST00000537230 PIK3CGP48736 1102 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 MAPK10P53779 464 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 TLE2Q04725 743 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 VEPH1Q14D04 833 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 SLC36A3Q495N2 470 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 ARMC12Q5T9G4 340 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 INTS11Q5TA45 600 aaKnown RBP12.66□□□□□ -0.38
TRIM25-202ENST00000537230 TPGS2Q68CL5 300 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 Q6ZNB5 142 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 TMEM26Q6ZUK4 368 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 GAREM2Q75VX8 874 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 TSPAN33Q86UF1 283 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 SFRP1Q8N474 314 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 OR56A4Q8NGH8 313 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 PROKR1Q8TCW9 393 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 TMEM125Q96AQ2 219 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 VOPP1Q96AW1 172 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 THAP11Q96EK4 314 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 TMEM169Q96HH4 297 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 COG8Q96MW5 612 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 RPF2Q9H7B2 306 aaKnown RBP12.66□□□□□ -0.38
TRIM25-202ENST00000537230 POLR1BQ9H9Y6 1135 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 ELOVL2Q9NXB9 296 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 DHRS7Q9Y394 339 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 A0A1W2PP18 115 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 ZNF821O75541 412 aaPredicted RBP12.66□□□□□ -0.38
TRIM25-202ENST00000537230 MLYCDO95822 493 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 FASP25445 335 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 DEFB103AP81534 67 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 ILF2Q12905 390 aaKnown RBP12.66□□□□□ -0.38
TRIM25-202ENST00000537230 NFYCQ13952 458 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 RAB39AQ14964 217 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 PHKG1Q16816 387 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 BBS7Q8IWZ6 715 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 FNDC5Q8NAU1 212 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 HJURPQ8NCD3 748 aaPredicted RBP12.66□□□□□ -0.38
TRIM25-202ENST00000537230 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
TRIM25-202ENST00000537230 SLX1AQ9BQ83 275 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 SMG9Q9H0W8 520 aaKnown RBP12.66□□□□□ -0.38
TRIM25-202ENST00000537230 ASB8Q9H765 288 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 MAGEE1Q9HCI5 957 aa12.66□□□□□ -0.38
TRIM25-202ENST00000537230 TUBA8Q9NY65 449 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms