RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC7-208	ENST00000537047	SMARCE1	Q969G3	411 aa		4.28	□□□□□ -1.72
CCDC7-208	ENST00000537047	ZNF582	Q96NG8	517 aa	Predicted RBP	4.28	□□□□□ -1.72
CCDC7-208	ENST00000537047	MAP7D2	Q96T17	732 aa		4.28	□□□□□ -1.72
CCDC7-208	ENST00000537047	OLFML3	Q9NRN5	406 aa		4.28	□□□□□ -1.72
CCDC7-208	ENST00000537047	SAGE1	Q9NXZ1	904 aa		4.28	□□□□□ -1.72
CCDC7-208	ENST00000537047	SLC7A7	Q9UM01	511 aa		4.28	□□□□□ -1.72
CCDC7-208	ENST00000537047	MEX3A	A1L020	520 aa	Known RBP	4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	PSMC4	P43686	418 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	NAB2	Q15742	525 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	MEP1A	Q16819	746 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	GPRIN3	Q6ZVF9	776 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	TSPAN33	Q86UF1	283 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	GALNT13	Q8IUC8	556 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	ERC1	Q8IUD2	1116 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	OR4C3	Q8NH37	302 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	RRP36	Q96EU6	259 aa	Known RBP	4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	CLEC7A	Q9BXN2	247 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	P2RY12	Q9H244	342 aa		4.27	□□□□□ -1.73
CCDC7-208	ENST00000537047	SMAD9	O15198	467 aa	Known RBP	4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	IPO7	O95373	1038 aa	Known RBP	4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	ZSCAN5DP	P0CG00	497 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	ACADL	P28330	430 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	RIG	Q13278	110 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	DRP2	Q13474	957 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	ADIPOQ	Q15848	244 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	KLC3	Q6P597	504 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	RSRC2	Q7L4I2	434 aa	Known RBP	4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	ARMC8	Q8IUR7	673 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	NGEF	Q8N5V2	710 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	ESX1	Q8N693	406 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	HJURP	Q8NCD3	748 aa	Predicted RBP	4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	KCNG4	Q8TDN1	519 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	ZUFSP	Q96AP4	578 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	FAM149B1	Q96BN6	582 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	TAS2R10	Q9NYW0	307 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	MOB4	Q9Y3A3	225 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	RIPK3	Q9Y572	518 aa		4.26	□□□□□ -1.73
CCDC7-208	ENST00000537047	CCDC196	A0A1B0GTZ2	297 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	PEX14	O75381	377 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	HNF4A	P41235	474 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	MSH2	P43246	934 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	MAPK9	P45984	424 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	GALC	P54803	685 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	RPL7A	P62424	266 aa	Known RBP	4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	NECTIN1	Q15223	517 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	C2CD6	Q53TS8	623 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	RNF168	Q8IYW5	571 aa	Predicted RBP	4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047		Q8N377	158 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	HSD17B8	Q92506	261 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	DAZL	Q92904	295 aa	Known RBP	4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	SCLT1	Q96NL6	688 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	TRMT1	Q9NXH9	659 aa	Known RBP	4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	EPHA6	Q9UF33	1036 aa		4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	DBNL	Q9UJU6	430 aa	Known RBP	4.25	□□□□□ -1.73
CCDC7-208	ENST00000537047	TMEM8B	A6NDV4	472 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	ATP6V0E1	O15342	81 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	HCRTR2	O43614	444 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	SPARC	P09486	303 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	RPS18	P62269	152 aa	Known RBP	4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	TEAD2	Q15562	447 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	ACAD10	Q6JQN1	1059 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	TPRG1	Q6ZUI0	275 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	PIGZ	Q86VD9	579 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	OR1J1	Q8NGS3	322 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	MYADM	Q96S97	322 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	LRRC61	Q9BV99	259 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	CROCC	Q5TZA2	2017 aa		4.24	□□□□□ -1.73
CCDC7-208	ENST00000537047	FAM237B	A0A1B0GVD1	139 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047		A8MU10	97 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	IFRD1	O00458	451 aa	Predicted RBP	4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	KHDRBS3	O75525	346 aa	Known RBP	4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	DAB1	O75553	588 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	GPI	P06744	558 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	H1F0	P07305	194 aa	Known RBP	4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	GPR143	P51810	404 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	PPP2R2B	Q00005	443 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	ZDHHC20	Q5W0Z9	365 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047		Q6ZRP5	223 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	CLEC17A	Q6ZS10	378 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	LRRTM1	Q86UE6	522 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	C11orf53	Q8IXP5	236 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	TRPC4AP	Q8TEL6	797 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	CENPT	Q96BT3	561 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	GPATCH1	Q9BRR8	931 aa	Known RBP	4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	ACKR4	Q9NPB9	350 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	A4GALT	Q9NPC4	353 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	ERAP1	Q9NZ08	941 aa		4.23	□□□□□ -1.73
CCDC7-208	ENST00000537047	TRIM49	P0CI25	452 aa		4.22	□□□□□ -1.73
CCDC7-208	ENST00000537047	TRIM49C	P0CI26	452 aa		4.22	□□□□□ -1.73
CCDC7-208	ENST00000537047	PIK3CA	P42336	1068 aa		4.22	□□□□□ -1.73
CCDC7-208	ENST00000537047	MAGEA11	P43364	429 aa		4.22	□□□□□ -1.73
CCDC7-208	ENST00000537047	CCR10	P46092	362 aa		4.22	□□□□□ -1.73
CCDC7-208	ENST00000537047	RAPSN	Q13702	412 aa		4.22	□□□□□ -1.73
CCDC7-208	ENST00000537047	E2F5	Q15329	346 aa		4.22	□□□□□ -1.73
CCDC7-208	ENST00000537047	SGSM1	Q2NKQ1	1148 aa		4.22	□□□□□ -1.73
CCDC7-208	ENST00000537047	TAF1B	Q53T94	588 aa	Predicted RBP	4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms