RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 UGT1A5P35504 534 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 PEX19P40855 299 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 DPP6P42658 865 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 HNMTP50135 292 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 GRB7Q14451 532 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 PTPRRQ15256 657 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 ANO7Q6IWH7 933 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 MILR1Q7Z6M3 343 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 ADIPOR2Q86V24 386 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 ZSWIM9Q86XI8 627 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 CELF5Q8N6W0 485 aaKnown RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 HIPK4Q8NE63 616 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 BOCQ9BWV1 1114 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 SLC29A3Q9BZD2 475 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 SMG9Q9H0W8 520 aaKnown RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 FBXO10Q9UK96 956 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 BTRCQ9Y297 605 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 ST14Q9Y5Y6 855 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 HELZP42694 1942 aaKnown RBP13.35□□□□□ -0.27
SMG6-203ENST00000536871 PRSS51A0A1B0GVH4 220 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 AQP12BA6NM10 295 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 H0YJX3 145 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 RGS14O43566 566 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 EEDO75530 441 aaKnown RBP13.35□□□□□ -0.27
SMG6-203ENST00000536871 SORBS2O94875 1100 aaKnown RBP13.35□□□□□ -0.27
SMG6-203ENST00000536871 ADH1CP00326 375 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 LINGO3P0C6S8 592 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 EPB42P16452 691 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 GGT5P36269 586 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 PRKG2Q13237 762 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 DYNC1I2Q13409 638 aaKnown RBP13.35□□□□□ -0.27
SMG6-203ENST00000536871 ADGRE1Q14246 886 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 TSPAN33Q86UF1 283 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 SPATA24Q86W54 205 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 AQP12AQ8IXF9 295 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 CDYL2Q8N8U2 506 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 BADQ92934 168 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 RHBDF1Q96CC6 855 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 TCEAL4Q96EI5 215 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 IPPKQ9H8X2 491 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 B4GALT6Q9UBX8 382 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 ZNF225Q9UK10 706 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 ADAMTS6Q9UKP5 1117 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 TIMM22Q9Y584 194 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 PRSS21Q9Y6M0 314 aa13.35□□□□□ -0.27
SMG6-203ENST00000536871 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 UPK3BL1B0FP48 263 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 UPK3BL2E5RIL1 263 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 SYNCRIPO60506 623 aaKnown RBP13.34□□□□□ -0.27
SMG6-203ENST00000536871 CAPNS1P04632 268 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 CAPN1P07384 714 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 HIST1H2AGP0C0S8 130 aaPredicted RBP13.34□□□□□ -0.27
SMG6-203ENST00000536871 HIST1H2ADP20671 130 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 XPAP23025 273 aaPredicted RBP13.34□□□□□ -0.27
SMG6-203ENST00000536871 ARL1P40616 181 aaPredicted RBP13.34□□□□□ -0.27
SMG6-203ENST00000536871 AP1S2P56377 157 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 MRPS22P82650 360 aaKnown RBP13.34□□□□□ -0.27
SMG6-203ENST00000536871 MS4A2Q01362 244 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 ZNF33BQ06732 778 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 GBX1Q14549 363 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 AASDHQ4L235 1098 aaPredicted RBP13.34□□□□□ -0.27
SMG6-203ENST00000536871 C6orf136Q5SQH8 315 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 LRRC70Q7Z2Q7 622 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 DHFR2Q86XF0 187 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 TRAM1L1Q8N609 369 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 CLDN19Q8N6F1 224 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 EFCAB3Q8N7B9 438 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 FNDC5Q8NAU1 212 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 VOPP1Q96AW1 172 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 HIST1H2AHQ96KK5 128 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 KLHL32Q96NJ5 620 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 HIST1H2AJQ99878 128 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 H2AFJQ9BTM1 129 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 ZSCAN5AQ9BUG6 496 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 SLC12A9Q9BXP2 914 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 FAM83DQ9H4H8 585 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 DTNAQ9Y4J8 743 aa13.34□□□□□ -0.27
SMG6-203ENST00000536871 TCRBV3S1A0A5B6 114 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 CCDC154A6NI56 674 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 PSMD11O00231 422 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 RFPL2O75678 378 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 STK16O75716 305 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 FTH1P02794 183 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 C1SP09871 688 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 UQCRBP14927 111 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 CD1EP15812 388 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 CYP2A7P20853 494 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 LHCGRP22888 699 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 AOAHP28039 575 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 SLC7A1P30825 629 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 POLR2JP52435 117 aaKnown RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 SH3BGRP55822 239 aaPredicted RBP13.33□□□□□ -0.27
SMG6-203ENST00000536871 ST8SIA6P61647 398 aa13.33□□□□□ -0.27
SMG6-203ENST00000536871 TRAF3Q13114 568 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms