RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 SPIDRQ14159 915 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 BRD3Q15059 726 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SPANXN3Q5MJ09 141 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 NKAIN2Q5VXU1 208 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CAPRIN2Q6IMN6 1127 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 MRNIPQ6NTE8 343 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TRMT10BQ6PF06 316 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TMEM26Q6ZUK4 368 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 B3GNT8Q7Z7M8 397 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CTAGE6Q86UF2 777 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 KCNMB4Q86W47 210 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SPNS2Q8IVW8 549 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CTAGE4Q8IX94 777 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CACTIN-AS1Q8N1I8 211 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FBXO36Q8NEA4 188 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 MNS1Q8NEH6 495 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FBXO25Q8TCJ0 367 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GATA6Q92908 595 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 LRRC39Q96DD0 335 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CFAP36Q96G28 342 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 C12orf66Q96MD2 445 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 NUDT22Q9BRQ3 303 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CARD6Q9BX69 1037 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TBC1D10AQ9BXI6 508 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 VPS37BQ9H9H4 285 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 RDH14Q9HBH5 336 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 EPB41L5Q9HCM4 733 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SLC40A1Q9NP59 571 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FBXO6Q9NRD1 293 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 POT1Q9NUX5 634 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 OGFRQ9NZT2 677 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SLC17A6Q9P2U8 582 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ZC3H7BQ9UGR2 993 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 DMGDHQ9UI17 866 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ACSL5Q9ULC5 683 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CDYLQ9Y232 598 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CRYL1Q9Y2S2 319 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 MSRB2Q9Y3D2 182 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PCDHB1Q9Y5F3 818 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ENTPD2Q9Y5L3 495 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ADAMTS20P59510 1910 aa11.07□□□□□ -0.64
TNFRSF1A-208ENST00000536194 NCOR2Q9Y618 2525 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 A0A1W2PNU3 283 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 LILRA5A6NI73 299 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 NDC80O14777 642 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 LIN7AO14910 233 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 NIPSNAP2O75323 286 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CSO75390 466 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TCEA3O75764 348 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 VIPP01282 170 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GSTM1P09488 218 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SLC35G4P0C7Q5 338 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 JUPP14923 745 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 AOAHP28039 575 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FMO4P31512 558 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 HALP42357 657 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PLTPP55058 493 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ADARP55265 1226 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FOXK2Q01167 660 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GUCY2DQ02846 1103 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GSTM4Q03013 218 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 BIRC2Q13490 618 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 THOC5Q13769 683 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 BOP1Q14137 746 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GPR18Q14330 331 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ISXQ2M1V0 245 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 AMZ1Q400G9 498 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 HSP90AA5PQ58FG0 334 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 RNF187Q5TA31 235 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ZNF549Q6P9A3 640 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ZNF574Q6ZN55 896 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 RBM44Q6ZP01 1051 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 USP53Q70EK8 1073 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SDCCAG8Q86SQ7 713 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 LRRC6Q86X45 466 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 VRK3Q8IV63 474 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TRIM48Q8IWZ4 208 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 WDR48Q8TAF3 677 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 JPH3Q8WXH2 748 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ELMO1Q92556 727 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CXorf40BQ96DE9 158 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CERS2Q96G23 380 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GFM1Q96RP9 751 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TCF12Q99081 682 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SLC38A3Q99624 504 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 NAT9Q9BTE0 207 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FOXP3Q9BZS1 431 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 UCK1Q9HA47 277 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 IARS2Q9NSE4 1012 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ZDHHC18Q9NUE0 388 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 IMP3Q9NV31 184 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 KCNK4Q9NYG8 393 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TMEM9Q9P0T7 183 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GALPQ9UBC7 116 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GNPTGQ9UJJ9 305 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FBXO5Q9UKT4 447 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 MED16Q9Y2X0 877 aa11.06□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PMS2P1A4D2B8 440 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GPC4O75487 556 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms