RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 DEXIO95424 95 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 TNNC2P02585 160 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 IFNAR1P17181 557 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 XBP1P17861 261 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 HTR1BP28222 390 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 GARSP41250 739 aaKnown RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 SGSHP51688 502 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 NDST1P52848 882 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 MAZP56270 477 aaKnown RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 RP1P56715 2156 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 PFN3P60673 137 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 YPEL5P62699 121 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 TNNC1P63316 161 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 MRPS35P82673 323 aaKnown RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 CDC16Q13042 620 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 HLTFQ14527 1009 aaKnown RBP eCLIP3.91□□□□□ -1.78
YBX3-205ENST00000536107 MYBPC3Q14896 1274 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 PDLIM3Q53GG5 364 aaPredicted RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 VWA5B1Q5TIE3 1220 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 FOXB2Q5VYV0 432 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 METRNLQ641Q3 311 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 SPECC1LQ69YQ0 1117 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 TMEM71Q6P5X7 295 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 RFWD3Q6PCD5 774 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 MACC1Q6ZN28 852 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 SPATC1Q76KD6 591 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 ERN2Q76MJ5 926 aaKnown RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 SFTPA2Q8IWL1 248 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 ARFGAP1Q8N6T3 406 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 BMPERQ8N8U9 685 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 FIBINQ8TAL6 211 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 KIAA1524Q8TCG1 905 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 ACTRT2Q8TDY3 377 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 POMGNT1Q8WZA1 660 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 DPF1Q92782 380 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 RMND5BQ96G75 393 aaPredicted RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 ANKRD36BP1Q96IX9 119 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 MAGEB10Q96LZ2 347 aaPredicted RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 IPO9Q96P70 1041 aaKnown RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 TUBGCP5Q96RT8 1024 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 SMAD5Q99717 465 aaKnown RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 SMOQ99835 787 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 TIPINQ9BVW5 301 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 PLA2G12AQ9BZM1 189 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 MTMR12Q9C0I1 747 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 SPRTNQ9H040 489 aaPredicted RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 LIME1Q9H400 295 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 ZHX3Q9H4I2 956 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 ZDHHC6Q9H6R6 413 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 OLAHQ9NV23 265 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 INTS7Q9NVH2 962 aaKnown RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 ASB6Q9NWX5 421 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 ARHGEF38Q9NXL2 777 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 RBAKQ9NYW8 714 aaPredicted RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 STMN3Q9NZ72 180 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 TMEM9Q9P0T7 183 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 LARSQ9P2J5 1176 aaKnown RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 PCDHGA6Q9Y5G7 932 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 ANAPC1Q9H1A4 1944 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 TP53BP1Q12888 1972 aaPredicted RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 POLEQ07864 2286 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 GOLGA6L7A0A1B0GV03 622 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 TISP43B9A030 160 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 ANKRD63C9JTQ0 380 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 H7C1Q1 480 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 MCF2LO15068 1137 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 ALOX15BO15296 676 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 CREB3O43889 395 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 KLHL41O60662 606 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 BEST1O76090 585 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 MT-ND3P03897 115 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 FAM200BP0CF97 657 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 CCDC130P13994 396 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 TRIM21P19474 475 aaKnown RBP3.9□□□□□ -1.79
YBX3-205ENST00000536107 AGAP20933 346 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 MUTP22033 750 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 PTPN4P29074 926 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 ADORA2BP29275 332 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 CHRNA3P32297 505 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 SLC11A2P49281 568 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 SRP54P61011 504 aaKnown RBP3.9□□□□□ -1.79
YBX3-205ENST00000536107 NUCB2P80303 420 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 EXOSC10Q01780 885 aaKnown RBP3.9□□□□□ -1.79
YBX3-205ENST00000536107 RBPJQ06330 500 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 KCNAB1Q14722 419 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 NPY5RQ15761 445 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 LONRF1Q17RB8 773 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 ALG11Q2TAA5 492 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 FSCBQ5H9T9 825 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 EARS2Q5JPH6 523 aaKnown RBP3.9□□□□□ -1.79
YBX3-205ENST00000536107 FAM209AQ5JX71 171 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 MPP7Q5T2T1 576 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 CPLX2Q6PUV4 134 aaKnown RBP3.9□□□□□ -1.79
YBX3-205ENST00000536107 C1orf186Q6ZWK4 172 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 CAMKMTQ7Z624 323 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 TECPR1Q7Z6L1 1165 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 SYVN1Q86TM6 617 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 WDR49Q8IV35 697 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 FAM217AQ8IXS0 508 aa3.9□□□□□ -1.79
YBX3-205ENST00000536107 APCDD1Q8J025 514 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms