RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 C6orf136Q5SQH8 315 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 LYPLAL1Q5VWZ2 237 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 PLPP4Q5VZY2 271 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 GTF2H2CQ6P1K8 395 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 PRMT9Q6P2P2 845 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 MACC1Q6ZN28 852 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 ZBTB2Q8N680 514 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 OR4F6Q8NGB9 312 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 METTL6Q8TCB7 284 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 VPS33AQ96AX1 596 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 ASIC4Q96FT7 647 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 LINC00597Q9H2U6 94 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 ABCD2Q9UBJ2 740 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 PPIL1Q9Y3C6 166 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 ASPDHA6ND91 283 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 KATNA1O75449 491 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 UGT2B4P06133 528 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 GDF5P43026 501 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 ERVK-8P63133 956 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 NRF1Q16656 503 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 SLC15A3Q8IY34 581 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 MINDY1Q8N5J2 469 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 OR2T34Q8NGX1 318 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 OR2T3Q8NH03 318 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 DGCR14Q96DF8 476 aaKnown RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 APOL5Q9BWW9 433 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 BBS2Q9BXC9 721 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 TRIM8Q9BZR9 551 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 BRINP2Q9C0B6 783 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 IPPKQ9H8X2 491 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 OARD1Q9Y530 152 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 SNX13Q9Y5W8 968 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 MTCL1Q9Y4B5 1905 aaKnown RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 C7orf72A4D263 438 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 GRM6O15303 877 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 OR6B1O95007 311 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 S100BP04271 92 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 PFKLP17858 780 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 PSMC3P17980 439 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 SH3BGRP55822 239 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 RCAN2Q14206 197 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 SLC5A9Q2M3M2 681 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 ATP13A5Q4VNC0 1218 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 CARD16Q5EG05 197 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 Q6ZVU0 165 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 USP45Q70EL2 814 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 CHERPQ8IWX8 916 aaKnown RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 SFRP1Q8N474 314 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 FNDC5Q8NAU1 212 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 ZNF784Q8NCA9 323 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 CHST14Q8NCH0 376 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 ZUFSPQ96AP4 578 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 LRRC58Q96CX6 371 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 OSBPL11Q9BXB4 747 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 EMILIN2Q9BXX0 1053 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 CPEB1Q9BZB8 566 aaKnown RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 ARMC1Q9NVT9 282 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 CNOT6Q9ULM6 557 aaKnown RBP13.15□□□□□ -0.3
VPS33B-202ENST00000535906 IRAK3Q9Y616 596 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
VPS33B-202ENST00000535906 CXorf51AA0A1B0GTR3 108 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 A0A1W2PP18 115 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 ETS2P15036 469 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 SLC6A2P23975 617 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 IL12AP29459 219 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 MRPL19P49406 292 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 B4GALNT1Q00973 533 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 GRIK2Q13002 908 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 TRAF3Q13114 568 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 DYNC1I2Q13409 638 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 APOFQ13790 326 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 MTX3Q5HYI7 312 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 COQ5Q5HYK3 327 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 HMBOX1Q6NT76 420 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 IYDQ6PHW0 289 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 IL27RAQ6UWB1 636 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 MCCC1Q96RQ3 725 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 PRPF18Q99633 342 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 CCT7Q99832 543 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 TDP1Q9NUW8 608 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 RIC8BQ9NVN3 520 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 CMTM6Q9NX76 183 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 INSL6Q9Y581 213 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 HCFC2Q9Y5Z7 792 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 AK5Q9Y6K8 562 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 SYNCRIPO60506 623 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 SLC22A3O75751 556 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 POP4O95707 220 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 PABPC1P11940 636 aaKnown RBP13.14□□□□□ -0.31
VPS33B-202ENST00000535906 GRIA3P42263 894 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 NSG1P42857 185 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 KCNK10P57789 538 aa13.14□□□□□ -0.31
VPS33B-202ENST00000535906 LSAMPQ13449 338 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms