RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CENPEQ02224 2701 aa20.78■□□□□ 0.92
SSH3-211ENST00000534112 ITPR2Q14571 2701 aa20.78■□□□□ 0.92
SSH3-211ENST00000534112 MGAT4DA6NG13 374 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 BUD23O43709 281 aaKnown RBP20.77■□□□□ 0.92
SSH3-211ENST00000534112 DPM1O60762 260 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 TMEM63AO94886 807 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 KRT1P04264 644 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 HNRNPH3P31942 346 aaKnown RBP20.77■□□□□ 0.92
SSH3-211ENST00000534112 ARCN1P48444 511 aaKnown RBP20.77■□□□□ 0.92
SSH3-211ENST00000534112 WASHC5Q12768 1159 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 ITGA9Q13797 1035 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 LRRC38Q5VT99 294 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 FAM69BQ5VUD6 431 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 GLT6D1Q7Z4J2 308 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 LUZP1Q86V48 1076 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 DSELQ8IZU8 1212 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 Q8NA96 180 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 BLOC1S5Q8TDH9 187 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 CPT1BQ92523 772 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 MRGPRX2Q96LB1 330 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 MFRPQ9BY79 579 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 NLNQ9BYT8 704 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 SLAMF7Q9NQ25 335 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 CASS4Q9NQ75 786 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 SAE1Q9UBE0 346 aaPredicted RBP20.77■□□□□ 0.92
SSH3-211ENST00000534112 TCFL5Q9UL49 500 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 ACSL5Q9ULC5 683 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 PKP3Q9Y446 797 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 SHANK1Q9Y566 2161 aa20.77■□□□□ 0.92
SSH3-211ENST00000534112 SSU72P8A0A1W2PR75 194 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 A1L4Q6 167 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 ZNF185O15231 689 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 DDX3YO15523 660 aaKnown RBP20.76■□□□□ 0.91
SSH3-211ENST00000534112 NFKB1P19838 968 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 MSH3P20585 1137 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 ARHGAP25P42331 645 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 TNNT3P45378 269 aaPredicted RBP20.76■□□□□ 0.91
SSH3-211ENST00000534112 NR2C2P49116 596 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 ITGA1P56199 1179 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 TPM4P67936 248 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 MRPL49Q13405 166 aaKnown RBP20.76■□□□□ 0.91
SSH3-211ENST00000534112 SLC1A5Q15758 541 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 ASTE1Q2TB18 679 aaPredicted RBP20.76■□□□□ 0.91
SSH3-211ENST00000534112 BZW1Q7L1Q6 419 aaKnown RBP20.76■□□□□ 0.91
SSH3-211ENST00000534112 DET1Q7L5Y6 550 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 RHOT1Q8IXI2 618 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 TFB1MQ8WVM0 346 aaKnown RBP20.76■□□□□ 0.91
SSH3-211ENST00000534112 NUDT9Q9BW91 350 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 TLR10Q9BXR5 811 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 SMOXQ9NWM0 555 aa20.76■□□□□ 0.91
SSH3-211ENST00000534112 G3BP2Q9UN86 482 aaKnown RBP20.76■□□□□ 0.91
SSH3-211ENST00000534112 SLC9B1P1A6NJY1 282 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 A6NL46 340 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 LCA5LO95447 670 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 DDAH2O95865 285 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 POLR2CP19387 275 aaPredicted RBP20.75■□□□□ 0.91
SSH3-211ENST00000534112 VARSP26640 1264 aaKnown RBP20.75■□□□□ 0.91
SSH3-211ENST00000534112 AKT1P31749 480 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 RORAP35398 523 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 VAV2P52735 878 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 ABRQ12979 859 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 ODF2Q5BJF6 829 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 SLC6A19Q695T7 634 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 CAVIN1Q6NZI2 390 aaKnown RBP20.75■□□□□ 0.91
SSH3-211ENST00000534112 MFSD7Q6UXD7 560 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 HPS6Q86YV9 775 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 RBMXL3Q8N7X1 1067 aaKnown RBP20.75■□□□□ 0.91
SSH3-211ENST00000534112 OR4E2Q8NGC2 313 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 OR2L2Q8NH16 312 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 ZNF398Q8TD17 642 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 NAT14Q8WUY8 206 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 CLIP3Q96DZ5 547 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 OXNAD1Q96HP4 312 aaPredicted RBP20.75■□□□□ 0.91
SSH3-211ENST00000534112 FANCEQ9HB96 536 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 COLEC10Q9Y6Z7 277 aa20.75■□□□□ 0.91
SSH3-211ENST00000534112 HIVEP3Q5T1R4 2406 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 KLHL33A6NCF5 533 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 F5H423 210 aaPredicted RBP20.74■□□□□ 0.91
SSH3-211ENST00000534112 CAPN1P07384 714 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 SLC35G4P0C7Q5 338 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 HLA-DPA1P20036 260 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 PTPRCAPQ14761 206 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 MED25Q71SY5 747 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 ZBTB2Q8N680 514 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 TMEM102Q8N9M5 508 aaPredicted RBP20.74■□□□□ 0.91
SSH3-211ENST00000534112 GLIS1Q8NBF1 620 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 IPMKQ8NFU5 416 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 PRR7Q8TB68 274 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 PNPLA2Q96AD5 504 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 FCRL5Q96RD9 977 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 SLC29A3Q9BZD2 475 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 C1GALT1Q9NS00 363 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 PCMTD2Q9NV79 361 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 MAP10Q9P2G4 905 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 KLHL8Q9P2G9 620 aaPredicted RBP20.74■□□□□ 0.91
SSH3-211ENST00000534112 FAM8A1Q9UBU6 413 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 POMT2Q9UKY4 750 aa20.74■□□□□ 0.91
SSH3-211ENST00000534112 DOPEY1Q5JWR5 2465 aa20.73■□□□□ 0.91
SSH3-211ENST00000534112 STX7O15400 261 aaKnown RBP20.73■□□□□ 0.91
SSH3-211ENST00000534112 POLBP06746 335 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms