RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 METRNLQ641Q3 311 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 SYTL1Q8IYJ3 562 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 CFAP206Q8IYR0 622 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 FERD3LQ96RJ6 166 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 SMAD5Q99717 465 aaKnown RBP12.69□□□□□ -0.38
COPB1-209ENST00000533096 GLOD4Q9HC38 313 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 PCMTD2Q9NV79 361 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 SLC24A2Q9UI40 661 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 B3GNT3Q9Y2A9 372 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 SPTAN1Q13813 2472 aaKnown RBP12.69□□□□□ -0.38
COPB1-209ENST00000533096 ICE1Q9Y2F5 2266 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 LRRD1A4D1F6 860 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 PEX12O00623 359 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 LRRTM2O43300 516 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 ZNF749O43361 778 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 PROSCO94903 275 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 SERPINC1P01008 464 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 CAPN1P07384 714 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 TNNT1P13805 278 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 HLA-DPA1P20036 260 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 TNNT3P45378 269 aaPredicted RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 LMAN1P49257 510 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 DYNLT1P63172 113 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 PTPRCAPQ14761 206 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 LLGL1Q15334 1064 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 LDLRAP1Q5SW96 308 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 GPRC6AQ5T6X5 926 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 C1orf189Q5VU69 101 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 ALKBH5Q6P6C2 394 aaKnown RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 ZNF517Q6ZMY9 492 aaPredicted RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 RBM43Q6ZSC3 357 aaKnown RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 RAB43Q86YS6 212 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 HPS6Q86YV9 775 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 PHC3Q8NDX5 983 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 BLOC1S5Q8TDH9 187 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 N4BP2L2Q92802 583 aaPredicted RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 SRPK1Q96SB4 655 aaKnown RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 NRTNQ99748 197 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 ZCCHC2Q9C0B9 1178 aaKnown RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 NAT10Q9H0A0 1025 aaKnown RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 SRMSQ9H3Y6 488 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 DEF6Q9H4E7 631 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 NFKBIL1Q9UBC1 381 aaPredicted RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 BZW2Q9Y6E2 419 aaKnown RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 DNMT3AQ9Y6K1 912 aaPredicted RBP12.68□□□□□ -0.38
COPB1-209ENST00000533096 COLEC10Q9Y6Z7 277 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 MYO9AB2RTY4 2548 aa12.68□□□□□ -0.38
COPB1-209ENST00000533096 GLYATL1P3A0A0U1RQE8 302 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 C9J4A7 227 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 SLC35G4P0C7Q5 338 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 PVRP15151 417 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 POU3F2P20265 443 aaPredicted RBP12.67□□□□□ -0.38
COPB1-209ENST00000533096 ELAVL4P26378 380 aaKnown RBP12.67□□□□□ -0.38
COPB1-209ENST00000533096 HMGCLP35914 325 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 SPAM1P38567 509 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 CHRNA4P43681 627 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 WNT3AP56704 352 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 ADCY2Q08462 1091 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 DMPKQ09013 629 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 MESDQ14696 234 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 NCF4Q15080 339 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 PDK1Q15118 436 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 LONRF2Q1L5Z9 754 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 ANO6Q4KMQ2 910 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 SIRPB2Q5JXA9 342 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 VWA5B1Q5TIE3 1220 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 SP5Q6BEB4 398 aaPredicted RBP12.67□□□□□ -0.38
COPB1-209ENST00000533096 RFX6Q8HWS3 928 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 ZADH2Q8N4Q0 377 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 PLD5Q8N7P1 536 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 ZNF398Q8TD17 642 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 LCN9Q8WX39 176 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
COPB1-209ENST00000533096 FER1L6-AS2Q96M78 137 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 LRFN5Q96NI6 719 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 ZBTB20Q9HC78 741 aaPredicted RBP12.67□□□□□ -0.38
COPB1-209ENST00000533096 C5AR2Q9P296 337 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 GPN3Q9UHW5 284 aaPredicted RBP12.67□□□□□ -0.38
COPB1-209ENST00000533096 OSGIN2Q9Y236 505 aa12.67□□□□□ -0.38
COPB1-209ENST00000533096 PTRH2Q9Y3E5 179 aaKnown RBP12.67□□□□□ -0.38
COPB1-209ENST00000533096 CREBBPQ92793 2442 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 A0A0A6YYK5 440 aaPredicted RBP12.66□□□□□ -0.38
COPB1-209ENST00000533096 MGAT4DA6NG13 374 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 SMTNL1A8MU46 457 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 E7EQ34 232 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 APOL1O14791 398 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 SERPING1P05155 500 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 ALPPP05187 535 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 CBSLP0DN79 551 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 PRF1P14222 555 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 ST6GAL1P15907 406 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 PRDX3P30048 256 aaKnown RBP12.66□□□□□ -0.38
COPB1-209ENST00000533096 RORAP35398 523 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 CBSP35520 551 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 FOXL2P58012 376 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 NAA30Q147X3 362 aaPredicted RBP12.66□□□□□ -0.38
COPB1-209ENST00000533096 SLC9A5Q14940 896 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 TEX44Q53QW1 395 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 ODF2Q5BJF6 829 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 FAM198BQ6UWH4 519 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms