RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 GOLGA8KD6RF30 607 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 GOLGA8TH3BQL2 631 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 HGSO14964 777 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 TP73O15350 636 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 EIF3HO15372 352 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 CD3EAPO15446 510 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 USP1O94782 785 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 TTC4O95801 387 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 VCLP18206 1134 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 XRCC1P18887 633 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 PSMA3P25788 255 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 FOXN2P32314 431 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 EPHA4P54764 986 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 HHEXQ03014 270 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 ACVR1Q04771 509 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 DMPKQ09013 629 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 CUL1Q13616 776 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 SPANXN3Q5MJ09 141 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 AGAP9Q5VTM2 703 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 LYPLAL1Q5VWZ2 237 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 CRTC3Q6UUV7 619 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 ABRAXAS1Q6UWZ7 409 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZDHHC24Q6UX98 284 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 CAPN12Q6ZSI9 719 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 TMPRSS9Q7Z410 1059 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 SDCCAG8Q86SQ7 713 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 TRAPPC5Q8IUR0 188 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 IGDCC3Q8IVU1 814 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 PALM2Q8IXS6 379 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 AGGF1Q8N302 714 aaeCLIP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 NXPE1Q8N323 547 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 FBXO39Q8N4B4 442 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 OR4D9Q8NGE8 314 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 HEXDCQ8WVB3 486 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 CCDC97Q96F63 343 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF514Q96K75 400 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 FCRL3Q96P31 734 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC38A3Q99624 504 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 CMKLR1Q99788 373 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 DPH1Q9BZG8 443 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 FAM129AQ9BZQ8 928 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 FOXP3Q9BZS1 431 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 EPB41L1Q9H4G0 881 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZDHHC3Q9NYG2 299 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 KCNK4Q9NYG8 393 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 IL1RAPL1Q9NZN1 696 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC23A2Q9UGH3 650 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 ATXN7L1Q9ULK2 861 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 UNC13CQ8NB66 2214 aa12.71□□□□□ -0.37
TRAPPC4-212ENST00000533058 LAMA5O15230 3695 aa12.71□□□□□ -0.38
TRAPPC4-212ENST00000533058 FAM208BQ5VWN6 2430 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 CFAP47Q6ZTR5 3102 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 PFDN6O15212 129 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 NDUFS3O75489 264 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 TNFSF15O95150 251 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 IDSP22304 550 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 ACRV1P26436 265 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 CA5AP35218 305 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 ABCG1P45844 678 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 CARSP49589 748 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 LIMK2P53671 638 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 UBE2IP63279 158 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 TUBB4BP68371 445 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 CRYMQ14894 314 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 FASTKD3Q14CZ7 662 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 DBN1Q16643 649 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 INSCQ1MX18 579 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 PLA2G4EQ3MJ16 856 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 AMZ1Q400G9 498 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 MAP9Q49MG5 647 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 MRNIPQ6NTE8 343 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 NEPROQ6NW34 567 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 WDR74Q6RFH5 385 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZNF574Q6ZN55 896 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 CEP128Q6ZU80 1094 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 TMEM135Q86UB9 458 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 PIANPQ8IYJ0 282 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 GABPB2Q8TAK5 448 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 HNRNPLLQ8WVV9 542 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 SEC14L1Q92503 715 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 FMO2Q99518 471 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 RDH14Q9HBH5 336 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 PRDM8Q9NQV8 689 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 LHX6Q9UPM6 363 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 TEX264Q9Y6I9 313 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 FAM169AQ9Y6X4 670 aa12.7□□□□□ -0.38
TRAPPC4-212ENST00000533058 TRBV23OR9-2A0A075B6M9 112 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 TRBV5-4A0A0C4DH59 114 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 IGHV5-10-1A0A0J9YXX1 117 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZCWPW2A0A1B0GU75 182 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 LILRA5A6NI73 299 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 OR2AG2A6NM03 316 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 E7ESA3 106 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 NVLO15381 856 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 PBLDP30039 288 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 TTPAP49638 278 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 CFHR1Q03591 330 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 COL28A1Q2UY09 1125 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms