RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PDK1Q15118 436 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 CHRNA6Q15825 494 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 SLC14A2Q15849 920 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 EIF2S3LQ2VIR3 472 aaKnown RBP16.9■□□□□ 0.3
PKP3-208ENST00000531857 IZUMO3Q5VZ72 239 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 CCDC70Q6NSX1 233 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 JMJD6Q6NYC1 403 aaPredicted RBP16.9■□□□□ 0.3
PKP3-208ENST00000531857 DUS1LQ6P1R4 473 aaKnown RBP16.9■□□□□ 0.3
PKP3-208ENST00000531857 FAM151BQ6UXP7 276 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 C17orf53Q8N3J3 647 aaPredicted RBP16.9■□□□□ 0.3
PKP3-208ENST00000531857 CD180Q99467 661 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 MFRPQ9BY79 579 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 LUC7LQ9NQ29 371 aaKnown RBP16.9■□□□□ 0.3
PKP3-208ENST00000531857 CASS4Q9NQ75 786 aa16.9■□□□□ 0.3
PKP3-208ENST00000531857 IMP3Q9NV31 184 aaKnown RBP16.9■□□□□ 0.3
PKP3-208ENST00000531857 CELSR2Q9HCU4 2923 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 A0A0A6YYK5 440 aaPredicted RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 APOL1O14791 398 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 ARCN1P48444 511 aaKnown RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 MESDQ14696 234 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 TEX44Q53QW1 395 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 PLEKHS1Q5SXH7 462 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 TMEM220Q6QAJ8 160 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 REXO1L1PQ8IX06 675 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 BEND7Q8N7W2 519 aaPredicted RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 ENDOVQ8N8Q3 282 aaKnown RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 FDCSPQ8NFU4 85 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 NAT14Q8WUY8 206 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 SRPK1Q96SB4 655 aaKnown RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 INSM2Q96T92 566 aaPredicted RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 NUDT9Q9BW91 350 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 WWP1Q9H0M0 922 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 CUEDC1Q9NWM3 386 aaPredicted RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 ZNF451Q9Y4E5 1061 aa16.89■□□□□ 0.29
PKP3-208ENST00000531857 EPN1Q9Y6I3 576 aaPredicted RBP16.89■□□□□ 0.29
PKP3-208ENST00000531857 SEC16AO15027 2179 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 LOC285095A0A1B0GVY8 99 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 OR6C74A6NCV1 312 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 ZNF487B1APH4 448 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 GAPDHSO14556 408 aaPredicted RBP16.88■□□□□ 0.29
PKP3-208ENST00000531857 PPP1R12AO14974 1030 aaPredicted RBP16.88■□□□□ 0.29
PKP3-208ENST00000531857 BUD23O43709 281 aaKnown RBP16.88■□□□□ 0.29
PKP3-208ENST00000531857 KIF5CO60282 957 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 TMEM63AO94886 807 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 ZBTB11O95625 1053 aaPredicted RBP16.88■□□□□ 0.29
PKP3-208ENST00000531857 H2AFZP0C0S5 128 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 PTPN3P26045 913 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 COL8A1P27658 744 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 CHRNA4P43681 627 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 KPNA2P52292 529 aaKnown RBP16.88■□□□□ 0.29
PKP3-208ENST00000531857 ITGA1P56199 1179 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 DYNLT1P63172 113 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 ABRQ12979 859 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 XRCC4Q13426 336 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 SIRPB2Q5JXA9 342 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 FNBP1LQ5T0N5 605 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 METRNLQ641Q3 311 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 KDELC1Q6UW63 502 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 H2AFVQ71UI9 128 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 DDHD1Q8NEL9 900 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 SPDYE1Q8NFV5 336 aaPredicted RBP16.88■□□□□ 0.29
PKP3-208ENST00000531857 TSGA10Q9BZW7 698 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 IL17CQ9P0M4 197 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 SLC24A2Q9UI40 661 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 CREBBPQ92793 2442 aa16.88■□□□□ 0.29
PKP3-208ENST00000531857 SSU72P8A0A1W2PR75 194 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 A6NL46 340 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 MEN1O00255 615 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 ZNF185O15231 689 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 LCA5LO95447 670 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 KLK3P07288 261 aaPredicted RBP16.87■□□□□ 0.29
PKP3-208ENST00000531857 CD68P34810 354 aaPredicted RBP16.87■□□□□ 0.29
PKP3-208ENST00000531857 SPAM1P38567 509 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 WNT3AP56704 352 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 PPP2R5EQ16537 467 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 LDLRAP1Q5SW96 308 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 GPRC6AQ5T6X5 926 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 SLC6A19Q695T7 634 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 ZNF787Q6DD87 383 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 DET1Q7L5Y6 550 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 OOSP2Q86WS3 158 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 DSELQ8IZU8 1212 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 SLC25A41Q8N5S1 370 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 RBMXL3Q8N7X1 1067 aaKnown RBP16.87■□□□□ 0.29
PKP3-208ENST00000531857 OR8K5Q8NH50 307 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 PRR7Q8TB68 274 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 DTX3LQ8TDB6 740 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 CTNNBL1Q8WYA6 563 aaPredicted RBP16.87■□□□□ 0.29
PKP3-208ENST00000531857 C19orf60Q96EN9 201 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 TEKT5Q96M29 485 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 C12orf66Q96MD2 445 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 LRFN5Q96NI6 719 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 TLR10Q9BXR5 811 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 MAK16Q9BXY0 300 aaKnown RBP16.87■□□□□ 0.29
PKP3-208ENST00000531857 ZCCHC2Q9C0B9 1178 aaKnown RBP16.87■□□□□ 0.29
PKP3-208ENST00000531857 SLAMF7Q9NQ25 335 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 SOHLH2Q9NX45 425 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 MAP10Q9P2G4 905 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms