RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PPM1JQ5JR12 505 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 GSDMCQ9BYG8 508 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 NCDNQ9UBB6 729 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 SPASTQ9UBP0 616 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 LGALS13Q9UHV8 139 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 PSMD13Q9UNM6 376 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 DOLKQ9UPQ8 538 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 TNRC6BQ9UPQ9 1833 aaKnown RBP17.32■□□□□ 0.36
CTSB-222ENST00000531551 PDZK1P1A8MUH7 402 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 AGPSO00116 658 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 MAP2K7O14733 419 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 LIN7AO14910 233 aaPredicted RBP17.31■□□□□ 0.36
CTSB-222ENST00000531551 GSTM1P09488 218 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 CRABP2P29373 138 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 NBL1P41271 181 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 GSTM4Q03013 218 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 BNIP3Q12983 259 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 ELOCQ15369 112 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 ZKSCAN8Q15776 578 aaPredicted RBP17.31■□□□□ 0.36
CTSB-222ENST00000531551 TAF1BQ53T94 588 aaPredicted RBP17.31■□□□□ 0.36
CTSB-222ENST00000531551 ACSBG2Q5FVE4 666 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 IL27RAQ6UWB1 636 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 OR2I1PQ8NGU4 316 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 ACBD3Q9H3P7 528 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 IL21RQ9HBE5 538 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 A0A096LPK6 155 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 RFPL1O75677 317 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 C2P06681 752 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 ENGP17813 658 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 IDSP22304 550 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 PDHA2P29803 388 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 PLA2G2CQ5R387 149 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 PLEKHS1Q5SXH7 462 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 TMEM207Q6UWW9 146 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 VRK3Q8IV63 474 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 SPATA6LQ8N4H0 392 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 GOLGA6L1Q8N7Z2 621 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 MZB1Q8WU39 189 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 UNKQ9C0B0 810 aaKnown RBP17.31■□□□□ 0.36
CTSB-222ENST00000531551 SYTL2Q9HCH5 934 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 LATS2Q9NRM7 1088 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 PCMTD2Q9NV79 361 aa17.31■□□□□ 0.36
CTSB-222ENST00000531551 SLC5A10A0PJK1 596 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 KLHL33A6NCF5 533 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 AQP9O43315 295 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 KCNJ13O60928 360 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 SLC35E2BP0CK96 405 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 PYGBP11216 843 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 CD9P21926 228 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 DGKAP23743 735 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 IL2P60568 153 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 SPEM2Q0P670 501 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 DNAJC3Q13217 504 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 METRNLQ641Q3 311 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 TIFABQ6ZNK6 161 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 TBC1D1Q86TI0 1168 aaPredicted RBP17.3■□□□□ 0.36
CTSB-222ENST00000531551 NRROSQ86YC3 692 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 ZNF548Q8NEK5 533 aaPredicted RBP17.3■□□□□ 0.36
CTSB-222ENST00000531551 GPBAR1Q8TDU6 330 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 EEF1AKMT1Q8WVE0 214 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 LINGO1Q96FE5 620 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 ZDHHC5Q9C0B5 715 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 POPDC3Q9HBV1 291 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 PRDM8Q9NQV8 689 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 UCKL1Q9NWZ5 548 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 ACOT9Q9Y305 439 aa17.3■□□□□ 0.36
CTSB-222ENST00000531551 FANCMQ8IYD8 2048 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 CACNA1HO95180 2353 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 GPC4O75487 556 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 PIAS2O75928 621 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 CER1O95813 267 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 MPOP05164 745 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 CCDC166P0CW27 439 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 ZNF37AP17032 561 aaPredicted RBP17.29■□□□□ 0.36
CTSB-222ENST00000531551 RGS4P49798 205 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 CLCNKAP51800 687 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 IRF9Q00978 393 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 DMPKQ09013 629 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 CSHL1Q14406 222 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 ZNF423Q2M1K9 1284 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 SRRM1Q8IYB3 904 aaKnown RBP17.29■□□□□ 0.36
CTSB-222ENST00000531551 C4orf33Q8N1A6 199 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 FSTL5Q8N475 847 aaPredicted RBP17.29■□□□□ 0.36
CTSB-222ENST00000531551 FAM46DQ8NEK8 389 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 CFAP61Q8NHU2 1237 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 ANKRD49Q8WVL7 239 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 DPEP2Q9H4A9 486 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 TMBIM4Q9HC24 238 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 TBC1D29Q9UFV1 150 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 A0A1B0GTQ1 180 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 SLC35G4P0C7Q5 338 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 KRT4P19013 534 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 ATP5DP30049 168 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 ABRQ12979 859 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 SF3A2Q15428 464 aaKnown RBP17.29■□□□□ 0.36
CTSB-222ENST00000531551 ZNF658BQ4V348 819 aaPredicted RBP17.29■□□□□ 0.36
CTSB-222ENST00000531551 XKR5Q6UX68 686 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 PIWIL4Q7Z3Z4 852 aaKnown RBP17.29■□□□□ 0.36
CTSB-222ENST00000531551 GKN2Q86XP6 184 aa17.29■□□□□ 0.36
CTSB-222ENST00000531551 CNPY4Q8N129 248 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms