RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 RESP18Q5W5W9 173 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 KIRREL2Q6UWL6 708 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 TPGS1Q6ZTW0 290 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 GALNT5Q7Z7M9 940 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 TLK2Q86UE8 772 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 ZNF589Q86UQ0 364 aaPredicted RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 DHX40Q8IX18 779 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 CCDC36Q8IYA8 594 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 MAML2Q8IZL2 1156 aaPredicted RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 ADSSL1Q8N142 457 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.58□□□□□ -1.52
CD44-231ENST00000531110 ANKRD42Q8N9B4 389 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 IL17REQ8NFR9 667 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 SEMA6DQ8NFY4 1073 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 SUN3Q8TAQ9 357 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 LRRC8CQ8TDW0 803 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 TRUB1Q8WWH5 349 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 WASF1Q92558 559 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 MTBPQ96DY7 904 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 LRRC46Q96FV0 321 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 ZBTB45Q96K62 511 aaPredicted RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 ZNF317Q96PQ6 595 aaPredicted RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 NUDT22Q9BRQ3 303 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 MRPS26Q9BYN8 205 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 TFB2MQ9H5Q4 396 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 SLA2Q9H6Q3 261 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 C17orf75Q9HAS0 396 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 USP29Q9HBJ7 922 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 TMBIM4Q9HC24 238 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 TM9SF3Q9HD45 589 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 MRPS30Q9NP92 439 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 PARVAQ9NVD7 372 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 NMRK1Q9NWW6 199 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 TFCP2L1Q9NZI6 479 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 NPAP1Q9NZP6 1156 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 IPO11Q9UI26 975 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 MAN2B2Q9Y2E5 1009 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 SLC27A6Q9Y2P4 619 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 UTP11Q9Y3A2 253 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 MYH13Q9UKX3 1938 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 SYNJ2O15056 1496 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 DENND4BO75064 1496 aaPredicted RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 WNK3Q9BYP7 1800 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 MED23Q9ULK4 1368 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 NRCAMQ92823 1304 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 MYH7P12883 1935 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 C15orf38-AP3S2A0A0A6YYH1 394 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 ESYT2A0FGR8 921 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 ARHGEF37A1IGU5 675 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 LINC01548A6NM66 108 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 BTBD18B2RXH4 712 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 HSBP1L1C9JCN9 74 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 AP4M1O00189 453 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TOR1AO14656 332 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 VILLO15195 856 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 PLA2G6O60733 806 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 NOS1APO75052 506 aaPredicted RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 PTP4A3O75365 173 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 RBBP9O75884 186 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 CRYABP02511 175 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 CHRM5P08912 532 aaPredicted RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 ARP10275 920 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 GFAPP14136 432 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 CREB1P16220 341 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 CXCR2P25025 360 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 HADHAP40939 763 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 CDK9P50750 372 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 DGKQP52824 942 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 AIF1P55008 147 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 PROK1P58294 105 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 ASPHQ12797 758 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 RALGDSQ12967 914 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 GPS1Q13098 491 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 FASTKD3Q14CZ7 662 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 EFTUD2Q15029 972 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD44-231ENST00000531110 UGP2Q16851 508 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 EDRF1Q3B7T1 1238 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 RRAGBQ5VZM2 374 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 ABLIM2Q6H8Q1 611 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 ZNF788Q6ZQV5 615 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 RAB11FIP2Q7L804 512 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 AMIGO2Q86SJ2 522 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 LHFPL3Q86UP9 236 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 GALNT13Q8IUC8 556 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TMEM126BQ8IUX1 230 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TBC1D10CQ8IV04 446 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 DCP1BQ8IZD4 617 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 PNPLA1Q8N8W4 532 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 RFWD2Q8NHY2 731 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 NCOA7Q8NI08 942 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TRIB2Q92519 343 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TUBGCP3Q96CW5 907 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TXNDC15Q96J42 360 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 B3GALT6Q96L58 329 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 CNOT6LQ96LI5 555 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 FYTTD1Q96QD9 318 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 KRT12Q99456 494 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 CCM2Q9BSQ5 444 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TEKT3Q9BXF9 490 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms