RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 CYP46A1Q9Y6A2 500 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 CNTNAP2Q9UHC6 1331 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 VWA3AA6NCI4 1184 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 ITM2AO43736 263 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 SLC37A4O43826 429 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 PRSS2P07478 247 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 CKMT1AP12532 417 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 GCFC2P16383 781 aaKnown RBP7.05□□□□□ -1.28
CSDE1-213ENST00000530784 QARSP47897 775 aaKnown RBP7.05□□□□□ -1.28
CSDE1-213ENST00000530784 SLC18A2Q05940 514 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 PPP2R5CQ13362 524 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 EFR3AQ14156 821 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 ANKRD1Q15327 319 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 SHBQ15464 509 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 NCAPH2Q6IBW4 605 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 TMEM105Q8N8V8 129 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 OR14A16Q8NHC5 309 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 PSPC1Q8WXF1 523 aaKnown RBP7.05□□□□□ -1.28
CSDE1-213ENST00000530784 HSPH1Q92598 858 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 STAMQ92783 540 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 ZNF274Q96GC6 653 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-213ENST00000530784 NAP1L4Q99733 375 aaKnown RBP7.05□□□□□ -1.28
CSDE1-213ENST00000530784 CLSTN3Q9BQT9 956 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 TMEM175Q9BSA9 504 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 MSTO1Q9BUK6 570 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 KCNMB3Q9NPA1 279 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 MRPL17Q9NRX2 175 aaKnown RBP7.05□□□□□ -1.28
CSDE1-213ENST00000530784 WDFY4Q6ZS81 3184 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 TECTAO75443 2155 aa7.05□□□□□ -1.28
CSDE1-213ENST00000530784 ZNF318Q5VUA4 2279 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 PEX12O00623 359 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 KLK10O43240 276 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 EPB41L2O43491 1005 aaKnown RBP7.04□□□□□ -1.28
CSDE1-213ENST00000530784 SLC25A17O43808 307 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 DDHD2O94830 711 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 ERLIN2O94905 339 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 URODP06132 367 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 XBP1P17861 261 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 YWHABP31946 246 aaKnown RBP7.04□□□□□ -1.28
CSDE1-213ENST00000530784 DCTDP32321 178 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 AMTP48728 403 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 PDLIM4P50479 330 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 CLCN4P51793 760 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 ARSFP54793 590 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 LAMTOR4Q0VGL1 99 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 EMC2Q15006 297 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 NADSYN1Q6IA69 706 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 C8orf82Q6P1X6 216 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-213ENST00000530784 C15orf39Q6ZRI6 1047 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 OTUD6AQ7L8S5 288 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 CLIP4Q8N3C7 705 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 RBMXL3Q8N7X1 1067 aaKnown RBP7.04□□□□□ -1.28
CSDE1-213ENST00000530784 RNF149Q8NC42 400 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 CNNM3Q8NE01 707 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 DNAAF1Q8NEP3 725 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 TCP11Q8WWU5 503 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 PRPF31Q8WWY3 499 aaKnown RBP7.04□□□□□ -1.28
CSDE1-213ENST00000530784 TMEM143Q96AN5 459 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 FAM20AQ96MK3 541 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 KLHL5Q96PQ7 755 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 TWNKQ96RR1 684 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 LXNQ9BS40 222 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 DHX33Q9H6R0 707 aaKnown RBP7.04□□□□□ -1.28
CSDE1-213ENST00000530784 UBN1Q9NPG3 1134 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 CD93Q9NPY3 652 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 WRAP73Q9P2S5 460 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-213ENST00000530784 SUFUQ9UMX1 484 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 KCNJ14Q9UNX9 436 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 GPR52Q9Y2T5 361 aa7.04□□□□□ -1.28
CSDE1-213ENST00000530784 PRG3Q9Y2Y8 225 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-213ENST00000530784 STK36Q9NRP7 1315 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 MYO7AQ13402 2215 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 KDM4EB2RXH2 506 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-213ENST00000530784 TSPAN1O60635 241 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 AXLP30530 894 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 NBL1P41271 181 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 OR1G1P47890 313 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 PPM1FP49593 454 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-213ENST00000530784 CLCN5P51795 746 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 CYP4A11Q02928 519 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 NCBP1Q09161 790 aaKnown RBP7.03□□□□□ -1.28
CSDE1-213ENST00000530784 TDGQ13569 410 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 SLC12A1Q13621 1099 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 TFDP1Q14186 410 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 NFATC4Q14934 902 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 XKR9Q5GH70 373 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 NOTUMQ6P988 496 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 FJX1Q86VR8 437 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 C4orf19Q8IY42 314 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 CCDC51Q96ER9 411 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 PYM1Q9BRP8 204 aaKnown RBP7.03□□□□□ -1.28
CSDE1-213ENST00000530784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.03□□□□□ -1.28
CSDE1-213ENST00000530784 TM6SF1Q9BZW5 370 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 MINDY3Q9H8M7 445 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 PDRG1Q9NUG6 133 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 MARCH5Q9NX47 278 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 DUSP12Q9UNI6 340 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 PIEZO1Q92508 2521 aa7.03□□□□□ -1.28
CSDE1-213ENST00000530784 ARL5CA6NH57 179 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms