RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 POT1Q9NUX5 634 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 UTP6Q9NYH9 597 aaKnown RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 MARCH4Q9P2E8 410 aaPredicted RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 MID2Q9UJV3 735 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 TMEM98Q9Y2Y6 226 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 ACOT9Q9Y305 439 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 DHRS7Q9Y394 339 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 OAS3Q9Y6K5 1087 aaKnown RBP7.79□□□□□ -1.16
SSBP3-211ENST00000528787 SDK1Q7Z5N4 2213 aa7.79□□□□□ -1.16
SSBP3-211ENST00000528787 A0A0U1RQS6 177 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 DYNC1I1O14576 645 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 RGS16O15492 202 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 MAP3K7O43318 606 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 MTX2O75431 263 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 SLCO2B1O94956 709 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 VIPP01282 170 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 MT-ND3P03897 115 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 S100BP04271 92 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 WNT1P04628 370 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 GSTA1P08263 222 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 MYBL2P10244 700 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 PNLIPP16233 465 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 XRCC1P18887 633 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 CYP2A7P20853 494 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 FDXRP22570 491 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 AOAHP28039 575 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 AP1S2P56377 157 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 IRX4P78413 519 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 MPP1Q00013 466 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 NHLH1Q02575 133 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 SPEM2Q0P670 501 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 HSPA14Q0VDF9 509 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 EIF2B5Q13144 721 aaKnown RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 BOP1Q14137 746 aaKnown RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 HSP90B2PQ58FF3 399 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 CDKL4Q5MAI5 379 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 BEND6Q5SZJ8 279 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 C6orf132Q5T0Z8 1188 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 ABRAXAS1Q6UWZ7 409 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 TIFABQ6ZNK6 161 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 PRR23CQ6ZRP0 262 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 TRIM74Q86UV6 250 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 SPATS2Q86XZ4 545 aaKnown RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 TBC1D21Q8IYX1 336 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 SLC22A15Q8IZD6 547 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 TCAIMQ8N3R3 496 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 CLDN19Q8N6F1 224 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 ARL10Q8N8L6 244 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 FAM181AQ8N9Y4 354 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 FAM46DQ8NEK8 389 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 OR4C6Q8NH72 309 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 MAPK15Q8TD08 544 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 MCOLN3Q8TDD5 553 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 OR1E3Q8WZA6 343 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 TSACCQ96A04 125 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 RAD51AP1Q96B01 352 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 CXorf40BQ96DE9 158 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 BIRC8Q96P09 236 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 WDR83Q9BRX9 315 aaKnown RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 TRIT1Q9H3H1 467 aaKnown RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 COG4Q9H9E3 785 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 UCK1Q9HA47 277 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 DCDC2Q9UHG0 476 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 LNPEPQ9UIQ6 1025 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 SLC39A10Q9ULF5 831 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 NOVA2Q9UNW9 492 aaKnown RBP7.78□□□□□ -1.16
SSBP3-211ENST00000528787 PLAAQ9Y263 795 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 CA5BQ9Y2D0 317 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 TMEM131Q92545 1883 aa7.78□□□□□ -1.16
SSBP3-211ENST00000528787 PCDH15Q96QU1 1955 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 CABIN1Q9Y6J0 2220 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 LNP1A1A4G5 178 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 FAM221BA6H8Z2 402 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 TMX2-CTNND1H3BSU7 103 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 NUDT21O43809 227 aaKnown RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 OR1I1O60431 355 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 GPC4O75487 556 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 FKBP9O95302 570 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 GP1BAP07359 652 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 RBP1P09455 135 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 LTA4HP09960 611 aaKnown RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 H2AFXP16104 143 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 CCND1P24385 295 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 PBLDP30039 288 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 GPR3P46089 330 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 CDKN1CP49918 316 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 HNMTP50135 292 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 CTSCP53634 463 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 EPHA4P54764 986 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 B4GALNT1Q00973 533 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 ASPHQ12797 758 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 ILKQ13418 452 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 SEMA3AQ14563 771 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 CASP8Q14790 479 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 NR0B2Q15466 257 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 SEPT7Q16181 437 aaKnown RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 KRT71Q3SY84 523 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 MROH9Q5TGP6 573 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 CYB5D1Q6P9G0 228 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms