RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 MGAT4DA6NG13 374 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 ZNF185O15231 689 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 GPR39O43194 453 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 PBLDP30039 288 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-210ENST00000527027 CD68P34810 354 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-210ENST00000527027 TNNT3P45378 269 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-210ENST00000527027 NR2C2P49116 596 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 KPNA2P52292 529 aaKnown RBP15.69■□□□□ 0.1
PTPRU-210ENST00000527027 DYNLT1P63172 113 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 MRPL49Q13405 166 aaKnown RBP15.69■□□□□ 0.1
PTPRU-210ENST00000527027 SLC18A3Q16572 532 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 LONRF2Q1L5Z9 754 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 SIRPB2Q5JXA9 342 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 FNBP1LQ5T0N5 605 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 PRAMEF17Q5VTA0 474 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 FBXO38Q6PIJ6 1188 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 KDELC1Q6UW63 502 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 MED25Q71SY5 747 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 BZW1Q7L1Q6 419 aaKnown RBP15.69■□□□□ 0.1
PTPRU-210ENST00000527027 SLC25A41Q8N5S1 370 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 TMEM102Q8N9M5 508 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-210ENST00000527027 PRR7Q8TB68 274 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 NUDT9Q9BW91 350 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 SLC29A3Q9BZD2 475 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 KIR3DX1Q9H7L2 352 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 LUZP4Q9P127 313 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 PKP3Q9Y446 797 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 SHANK1Q9Y566 2161 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 DOPEY1Q5JWR5 2465 aa15.69■□□□□ 0.1
PTPRU-210ENST00000527027 LRBAP50851 2863 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 KLHL33A6NCF5 533 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 A6NL46 340 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 GAPDHSO14556 408 aaPredicted RBP15.68■□□□□ 0.1
PTPRU-210ENST00000527027 GYPCP04921 128 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 TMEM253P0C7T8 217 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 POLR2CP19387 275 aaPredicted RBP15.68■□□□□ 0.1
PTPRU-210ENST00000527027 MSH3P20585 1137 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 HNRNPH3P31942 346 aaKnown RBP15.68■□□□□ 0.1
PTPRU-210ENST00000527027 RORAP35398 523 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 ARHGAP25P42331 645 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 CHRNA4P43681 627 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 VAV2P52735 878 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 RRADP55042 308 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 ITGA1P56199 1179 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 TPM4P67936 248 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 WASHC5Q12768 1159 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 PRKD1Q15139 912 aaPredicted RBP15.68■□□□□ 0.1
PTPRU-210ENST00000527027 LRRC38Q5VT99 294 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 FAM69BQ5VUD6 431 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 SLC6A19Q695T7 634 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 DUS1LQ6P1R4 473 aaKnown RBP15.68■□□□□ 0.1
PTPRU-210ENST00000527027 GLT6D1Q7Z4J2 308 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 RBMXL3Q8N7X1 1067 aaKnown RBP15.68■□□□□ 0.1
PTPRU-210ENST00000527027 GLIS1Q8NBF1 620 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 SPDYE1Q8NFV5 336 aaPredicted RBP15.68■□□□□ 0.1
PTPRU-210ENST00000527027 OR2L2Q8NH16 312 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 SLC35G2Q8TBE7 412 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 ZNF398Q8TD17 642 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 BLOC1S5Q8TDH9 187 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 PNPLA2Q96AD5 504 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 RNF25Q96BH1 459 aaPredicted RBP15.68■□□□□ 0.1
PTPRU-210ENST00000527027 CLIP3Q96DZ5 547 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 MRGPRX2Q96LB1 330 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 PPM1MQ96MI6 270 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 TLR10Q9BXR5 811 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 FANCEQ9HB96 536 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 SYTL2Q9HCH5 934 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 SMOXQ9NWM0 555 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 GPR83Q9NYM4 423 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 MAP10Q9P2G4 905 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 COLEC10Q9Y6Z7 277 aa15.68■□□□□ 0.1
PTPRU-210ENST00000527027 SLC9B1P1A6NJY1 282 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 BUD23O43709 281 aaKnown RBP15.67■□□□□ 0.1
PTPRU-210ENST00000527027 LCA5LO95447 670 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 KRT1P04264 644 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 CAPN1P07384 714 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 PYGMP11217 842 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 NFKB1P19838 968 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 CDH3P22223 829 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 AKT1P31749 480 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 ARCN1P48444 511 aaKnown RBP15.67■□□□□ 0.1
PTPRU-210ENST00000527027 ABRQ12979 859 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 PRKAA1Q13131 559 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 GSE1Q14687 1217 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 SLC1A5Q15758 541 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 ODF2Q5BJF6 829 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 DET1Q7L5Y6 550 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 ZBTB2Q8N680 514 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 OR4E2Q8NGC2 313 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 TFB1MQ8WVM0 346 aaKnown RBP15.67■□□□□ 0.1
PTPRU-210ENST00000527027 C1GALT1Q9NS00 363 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 PCMTD2Q9NV79 361 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 SAE1Q9UBE0 346 aaPredicted RBP15.67■□□□□ 0.1
PTPRU-210ENST00000527027 HIVEP3Q5T1R4 2406 aa15.67■□□□□ 0.1
PTPRU-210ENST00000527027 WIPF3A6NGB9 483 aa15.66■□□□□ 0.1
PTPRU-210ENST00000527027 ENO4A6NNW6 628 aa15.66■□□□□ 0.1
PTPRU-210ENST00000527027 DDX3YO15523 660 aaKnown RBP15.66■□□□□ 0.1
PTPRU-210ENST00000527027 SLC35G4P0C7Q5 338 aa15.66■□□□□ 0.1
PTPRU-210ENST00000527027 MSL3P1P0C860 447 aa15.66■□□□□ 0.1
PTPRU-210ENST00000527027 HLA-DPA1P20036 260 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms