RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CCDC166P0CW27 439 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 TPBGLP0DKB5 382 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 CBSLP0DN79 551 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 PKMP14618 531 aaKnown RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 PCSK2P16519 638 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 ZNF7P17097 686 aaPredicted RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 ENGP17813 658 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 GKP32189 559 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 MC4RP32245 332 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 CBSP35520 551 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 MAPK9P45984 424 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 RECQLP46063 649 aaPredicted RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 RPL14P50914 215 aaKnown RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 AQP5P55064 265 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 ARHGAP8P85298 464 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 IRF9Q00978 393 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 ZBTB16Q05516 673 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 ITGA9Q13797 1035 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 PUM1Q14671 1186 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS11-201ENST00000524454 CDKN3Q16667 212 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 FAM182AQ5T1J6 154 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 C16orf46Q6P387 395 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 ZNF549Q6P9A3 640 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 FRMD7Q6ZUT3 714 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 KDELC2Q7Z4H8 507 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 ARHGAP24Q8N264 748 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 HDDC3Q8N4P3 179 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS11-201ENST00000524454 ACVR1CQ8NER5 493 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 OR6K2Q8NGY2 324 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 STAG3L4Q8TBR4 150 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 NETO1Q8TDF5 533 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 KCTD4Q8WVF5 259 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 KIAA1191Q96A73 305 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 KLHL29Q96CT2 875 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 ATXN7L3BQ96GX2 97 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 EXOC2Q96KP1 924 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 NSMCE3Q96MG7 304 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 BIRC8Q96P09 236 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 OLFM1Q99784 485 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 CCDC28BQ9BUN5 200 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 GATA5Q9BWX5 397 aaPredicted RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 GPR63Q9BZJ6 419 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 BTBD1Q9H0C5 482 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 C12orf65Q9H3J6 166 aaKnown RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 SUV39H2Q9H5I1 410 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 KCTD5Q9NXV2 234 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 DLL3Q9NYJ7 618 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 HEY2Q9UBP5 337 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 RUVBL2Q9Y230 463 aaKnown RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 DNAJC16Q9Y2G8 782 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 SLC30A1Q9Y6M5 507 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 SCN8AQ9UQD0 1980 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 DCHS1Q96JQ0 3298 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 PTPRZ1P23471 2315 aaPredicted RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 IGLV3-16A0A075B6K0 115 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 A8MT66 165 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 METTL12A8MUP2 240 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 CAPN14A8MX76 684 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 CDX4O14627 284 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 ZNF195O14628 629 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 SLC30A4O14863 429 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 AURKAO14965 403 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 KLK8O60259 260 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 DLX3O60479 287 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 GJB3O75712 270 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 WFS1O76024 890 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 SRP72O76094 671 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 ZIC2O95409 532 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 TOP3BO95985 862 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 IGLV3-19P01714 112 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 CYP2A6P11509 494 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 ENO3P13929 434 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 CD1DP15813 335 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 IMPDH1P20839 514 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 PTPN4P29074 926 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 SERPINB3P29508 390 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 OXTRP30559 389 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 DRD3P35462 400 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 SPAM1P38567 509 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 LIG3P49916 1009 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 CCNHP51946 323 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 INHBCP55103 352 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 CDKN2DP55273 166 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 RAB15P59190 212 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 IL2P60568 153 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 PPP2CBP62714 309 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 HERVK_113P63132 956 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 PPP2CAP67775 309 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 BNC1Q01954 994 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 CNTN1Q12860 1018 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 OVGP1Q12889 678 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 DLG1Q12959 904 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 NFATC2Q13469 925 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 PEX6Q13608 980 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 ELAVL3Q14576 367 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 TTC31Q49AM3 519 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 CFAP157Q5JU67 520 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 RBM20Q5T481 1227 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms