RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	RAB43	Q86YS6	212 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	C10orf107	Q8IVU9	208 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ZDHHC14	Q8IZN3	488 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	OFCC1	Q8IZS5	231 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ARFGAP1	Q8N6T3	406 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CELF5	Q8N6W0	485 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	FAM98A	Q8NCA5	519 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	FAM81A	Q8TBF8	368 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	GPR152	Q8TDT2	470 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	DQX1	Q8TE96	717 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	THRSP	Q92748	146 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ACOX2	Q99424	681 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	NPY6R	Q99463	290 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	GSDMC	Q9BYG8	508 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CST11	Q9H112	138 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	KCNN2	Q9H2S1	579 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TTYH1	Q9H313	450 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	ACSS3	Q9H6R3	686 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CD248	Q9HCU0	757 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SPAG4	Q9NPE6	437 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SLC2A4RG	Q9NR83	387 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ZNF222	Q9UK12	451 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ZNF221	Q9UK13	617 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	VPS4A	Q9UN37	437 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SNX7	Q9UNH6	387 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CHKB	Q9Y259	395 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226		C9IYK1	514 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226		C9J4A7	227 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TMEM189-UBE2V1	I3L0A0	370 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TRAFD1	O14545	582 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	NRP1	O14786	923 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CCNT2	O60583	730 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	TSPAN3	O60637	253 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	AVIL	O75366	819 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PAGE1	O75459	146 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	FGF18	O76093	207 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	LRIG2	O94898	1065 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	HLA-DQA2	P01906	255 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	RLN2	P04090	185 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	COX7A2	P14406	83 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MGAT1	P26572	445 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SSTR1	P30872	391 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MAGEA11	P43364	429 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	RFX3	P48380	749 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PSMD8	P48556	350 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	POLD2	P49005	469 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ARHGAP8	P85298	464 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PITPNA	Q00169	270 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	RPL6	Q02878	288 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	FOXC1	Q12948	553 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ABR	Q12979	859 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PAFAH1B3	Q15102	231 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	PRKD1	Q15139	912 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	TAZ	Q16635	292 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MTX3	Q5HYI7	312 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	RAB41	Q5JT25	222 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CLLU1OS	Q5K130	101 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	C1orf189	Q5VU69	101 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	KIAA0319	Q5VV43	1072 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	RHBDF2	Q6PJF5	856 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	KCNMB4	Q86W47	210 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	GKN2	Q86XP6	184 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	COLGALT2	Q8IYK4	626 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TTC29	Q8NA56	475 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	OR10H5	Q8NGA6	315 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	RHBDD1	Q8TEB9	315 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	FOXJ1	Q92949	421 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TMCO6	Q96DC7	493 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CELF6	Q96J87	481 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	C8orf48	Q96LL4	319 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	KLHL32	Q96NJ5	620 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	VPS35	Q96QK1	796 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TCF12	Q99081	682 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	LGMN	Q99538	433 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	KLF6	Q99612	283 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	HERPUD2	Q9BSE4	406 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CFHR5	Q9BXR6	569 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ACE2	Q9BYF1	805 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	GBA3	Q9H227	469 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	LRMDA	Q9H2I8	198 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CLK4	Q9HAZ1	481 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	NEUROD4	Q9HD90	331 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MID1IP1	Q9NPA3	183 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SLC35C2	Q9NQQ7	365 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PIGV	Q9NUD9	493 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	EXD2	Q9NVH0	621 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	C14orf105	Q9NVL8	296 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	GNPTG	Q9UJJ9	305 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MKLN1	Q9UL63	735 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SAMD4A	Q9UPU9	718 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	SCML2	Q9UQR0	700 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PCDHGB1	Q9Y5G3	927 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PEX16	Q9Y5Y5	336 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	MEIS3P2	A8K0S8	358 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	VSTM5	A8MXK1	200 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226		E9PAM4	449 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PITPNM1	O00562	1244 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms