RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 ITPKBP27987 946 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 SLC5A2P31639 672 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 CSTF2P33240 577 aaKnown RBP eCLIP16.02■□□□□ 0.16
PABPC1-221ENST00000522720 ETV5P41161 510 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 TERF1P54274 439 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 FASTKD1Q53R41 847 aaKnown RBP16.02■□□□□ 0.16
PABPC1-221ENST00000522720 ANKRD22Q5VYY1 191 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 ARMC3Q5W041 872 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 C19orf48Q6RUI8 117 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 CAND1Q86VP6 1230 aaKnown RBP16.02■□□□□ 0.16
PABPC1-221ENST00000522720 JAMLQ86YT9 394 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 MCUQ8NE86 351 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 GPR150Q8NGU9 434 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 C12orf66Q96MD2 445 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 NAPGQ99747 312 aaPredicted RBP16.02■□□□□ 0.16
PABPC1-221ENST00000522720 B3GNT4Q9C0J1 378 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 COG4Q9H9E3 785 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 MRM3Q9HC36 420 aaKnown RBP16.02■□□□□ 0.16
PABPC1-221ENST00000522720 SYBUQ9NX95 663 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 ACSL6Q9UKU0 697 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 CFAP20Q9Y6A4 193 aaKnown RBP16.02■□□□□ 0.16
PABPC1-221ENST00000522720 SAR1BQ9Y6B6 198 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 PRSS21Q9Y6M0 314 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 OR1I1O60431 355 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 TMEM63AO94886 807 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 C9P02748 559 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 FGF3P11487 239 aaPredicted RBP16.01■□□□□ 0.15
PABPC1-221ENST00000522720 MLNP12872 115 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 NMBRP28336 390 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 PPARGP37231 505 aaPredicted RBP16.01■□□□□ 0.15
PABPC1-221ENST00000522720 MAPK10P53779 464 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 RPA4Q13156 261 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 COL28A1Q2UY09 1125 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 AARS2Q5JTZ9 985 aaKnown RBP16.01■□□□□ 0.15
PABPC1-221ENST00000522720 SNAP47Q5SQN1 464 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 ZNF449Q6P9G9 518 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 SPACA3Q8IXA5 215 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 KCNE4Q8WWG9 221 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 USP7Q93009 1102 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 NAF1Q96HR8 494 aaKnown RBP16.01■□□□□ 0.15
PABPC1-221ENST00000522720 RMDN2Q96LZ7 410 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 DPH1Q9BZG8 443 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 RAB33BQ9H082 229 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 OR52A5Q9H2C5 316 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 EPHA6Q9UF33 1036 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 SOX13Q9UN79 622 aa16.01■□□□□ 0.15
PABPC1-221ENST00000522720 CTAGE9A4FU28 777 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 A8MU76 341 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 B4E171 279 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 C9orf172C9J069 976 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 F8W8V4 182 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 CD3EAPO15446 510 aaKnown RBP16■□□□□ 0.15
PABPC1-221ENST00000522720 CAPN5O15484 640 aaPredicted RBP16■□□□□ 0.15
PABPC1-221ENST00000522720 AVILO75366 819 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 FTH1P02794 183 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 TSPAN7P41732 249 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 ABCG1P45844 678 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 CAPZBP47756 277 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 CD151P48509 253 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 GFERP55789 205 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 TLE3Q04726 772 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 SEMA3AQ14563 771 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 TMEM164Q5U3C3 297 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 CREG2Q8IUH2 290 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 RSC1A1Q92681 617 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 SLCO2A1Q92959 643 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 MFSD3Q96ES6 412 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 C9orf72Q96LT7 481 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 TAAR9Q96RI9 348 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 DDX47Q9H0S4 455 aaKnown RBP16■□□□□ 0.15
PABPC1-221ENST00000522720 KIR3DX1Q9H7L2 352 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 XAB2Q9HCS7 855 aaKnown RBP16■□□□□ 0.15
PABPC1-221ENST00000522720 KCND1Q9NSA2 647 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 CATSPERZQ9NTU4 200 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 OCIAD1Q9NX40 245 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 KLHL3Q9UH77 587 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 PCYOX1Q9UHG3 505 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 ANAPC5Q9UJX4 755 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 PCDHGA3Q9Y5H0 932 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 HEBP2Q9Y5Z4 205 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16■□□□□ 0.153e-29■■■□□ 15
PABPC1-221ENST00000522720 COLEC10Q9Y6Z7 277 aa16■□□□□ 0.15
PABPC1-221ENST00000522720 MAGEB16A2A368 324 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 SDR42E2A6NKP2 422 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 LIN7AO14910 233 aaPredicted RBP15.99■□□□□ 0.15
PABPC1-221ENST00000522720 TOX3O15405 576 aaPredicted RBP15.99■□□□□ 0.15
PABPC1-221ENST00000522720 PRAMEF10O60809 474 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 ANKRD34CP0C6C1 535 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 OR56A5P0C7T3 313 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 ARNTP27540 789 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 NDUFS1P28331 727 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 PDHA2P29803 388 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 LEPRP48357 1165 aaKnown RBP15.99■□□□□ 0.15
PABPC1-221ENST00000522720 TTPAP49638 278 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 PPP1R7Q15435 360 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 DUS1LQ6P1R4 473 aaKnown RBP15.99■□□□□ 0.15
PABPC1-221ENST00000522720 KLHL35Q6PF15 583 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 CES3Q6UWW8 571 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 BMPERQ8N8U9 685 aa15.99■□□□□ 0.15
PABPC1-221ENST00000522720 NAT8LQ8N9F0 302 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms