RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CTSOP43234 321 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 SYPL2Q5VXT5 272 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 KLHL24Q6TFL4 600 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 PTCHD4Q6ZW05 846 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 HIPK1Q86Z02 1210 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 CLEC4CQ8WTT0 213 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 OTUB2Q96DC9 234 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 MUC13Q9H3R2 512 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 CACNG4Q9UBN1 327 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 PRKAB1Q9Y478 270 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF37AP17032 561 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 AQP1P29972 269 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 KCNJ2P63252 427 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 RALGPS1Q5JS13 557 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 PDE12Q6L8Q7 609 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 LRRTM4Q86VH4 590 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 IQCKQ8N0W5 287 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 UBASH3BQ8TF42 649 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 EMID1Q96A84 441 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 PPM1MQ96MI6 270 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 PTPN18Q99952 460 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 NUSAP1Q9BXS6 441 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 WDR55Q9H6Y2 383 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 MINDY3Q9H8M7 445 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 RNF186Q9NXI6 227 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 EGFL7Q9UHF1 273 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ENTPD5O75356 428 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 IFNW1P05000 195 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 HAPLN1P10915 354 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 DCTN2Q13561 401 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ADGRD1Q6QNK2 874 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ATCAYQ86WG3 371 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 SIDT2Q8NBJ9 832 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 FAM46DQ8NEK8 389 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF384Q8TF68 577 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 TRIM63Q969Q1 353 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 KLHL31Q9H511 634 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 WFS1O76024 890 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF30P17039 623 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 CHRNB2P17787 502 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 MAGEA11P43364 429 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 CDCA2Q69YH5 1023 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 FSTL4Q6MZW2 842 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ZBED6CLQ96FA7 236 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 GTPBP2Q9BX10 602 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 PIM1P11309 404 aaPredicted RBP16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 ALDH4A1P30038 563 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 RPL5P46777 297 aaKnown RBP16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 RANBP3LQ86VV4 465 aaPredicted RBP16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 AGAP2Q99490 1192 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 EFCAB11Q9BUY7 163 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 SMOC2Q9H3U7 446 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 EPB41L1Q9H4G0 881 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 DNAJA2O60884 412 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 PLA2G16P53816 162 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 PRKD1Q15139 912 aaPredicted RBP16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 ITPRIPL2Q3MIP1 535 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 MAP4K5Q9Y4K4 846 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 WNT6Q9Y6F9 365 aa16.02■□□□□ 0.16
PCDHA3-201ENST00000522353 PRR5-ARHGAP8B1AHC4 643 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 ATP5A1P25705 553 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 ARHGAP8P85298 464 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 KLF10Q13118 480 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 NDUFA5Q16718 116 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 ARL13AQ5H913 290 aaPredicted RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 LRRC73Q5JTD7 316 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 JSRP1Q96MG2 331 aaPredicted RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 C7orf26Q96N11 449 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 RIOK2Q9BVS4 552 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 OGDHLQ9ULD0 1010 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 CNOT6Q9ULM6 557 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 MRPS7Q9Y2R9 242 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 B4DGG1 531 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 SLC10A3P09131 477 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 CDK9P50750 372 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 MLLT6P55198 1093 aaPredicted RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 TEAD2Q15562 447 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 AMIGO2Q86SJ2 522 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 FBXO15Q8NCQ5 510 aaPredicted RBP16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 BCO2Q9BYV7 579 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 C1orf109Q9NX04 203 aa16.02■□□□□ 0.15
PCDHA3-201ENST00000522353 C9IYK1 514 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 RNF225M0QZC1 329 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 CD247P20963 164 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 VIPR1P32241 457 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 OMPP47874 163 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 BTN2A1Q7KYR7 527 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 GALNT7Q86SF2 657 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 GMLQ99445 158 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 SIRPGQ9P1W8 387 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 WRAP73Q9P2S5 460 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 TLL2Q9Y6L7 1015 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 ELOVL7A1L3X0 281 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 CHRNA1P02708 482 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 CHRNGP07510 517 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 CCR8P51685 355 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 ATXN1P54253 815 aaKnown RBP16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 GLYATQ6IB77 296 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms